LOCUS AEE83834.1 643 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana disease resistance protein (TIR-NBS
class) protein.
ACCESSION CP002687-2868
PROTEIN_ID AEE83834.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RLM3"
/locus_tag="AT4G16990"
/gene_synonym="DL4525W"
/gene_synonym="FCAALL.324"
/gene_synonym="RESISTANCE TO LEPTOSPHAERIA MACULANS 3"
/inference="Similar to RNA sequence,
EST:INSD:AV810609.1,INSD:AV808334.1,INSD:AV802566.1,
INSD:EH846020.1,INSD:EL089729.1,INSD:AV796210.1,
INSD:AU239285.2,INSD:BP847737.1,INSD:EL097977.1,
INSD:EL087212.1,INSD:AV813097.1,INSD:BP785252.1,
INSD:BP863322.1,INSD:EG466149.1,INSD:AU230575.1,
INSD:AV826763.1,INSD:EG513532.1,INSD:EH947467.1,
INSD:AV814959.1,INSD:EH978678.1,INSD:EL185131.1,
INSD:BP637977.1,INSD:EL065731.1,INSD:AV809355.1,
INSD:ES444478.1,INSD:BP660470.1,INSD:EL191614.1,
INSD:AV814911.1,INSD:EH983019.1,INSD:AV810516.1,
INSD:EL113676.1,INSD:EH927383.1,INSD:EH822456.1,
INSD:EH887611.1,INSD:EL224640.1,INSD:EL327875.1,
INSD:EG513531.1,INSD:AV565063.1,INSD:EL142879.1,
INSD:EL216720.1,INSD:EH813532.1,INSD:BP858235.1,
INSD:EH882470.1,INSD:EH980386.1,INSD:BP780257.1,
INSD:ES444476.1,INSD:ES444477.1,INSD:AV523963.1,
INSD:AI997546.1,INSD:EL173478.1,INSD:EH893597.1,
INSD:EL224899.1,INSD:EL234448.1,INSD:EL114505.1,
INSD:EL071413.1,INSD:EH856581.1,INSD:BP863756.1"
/note="RESISTANCE TO LEPTOSPHAERIA MACULANS 3 (RLM3);
FUNCTIONS IN: ATP binding; INVOLVED IN: defense response
to fungus, incompatible interaction, regulation of defense
response by callose deposition, defense response;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC
(InterPro:IPR002182), Disease resistance/zinc
finger/chromosome condensation-like region
(InterPro:IPR013591), Disease resistance protein
(InterPro:IPR000767); BEST Arabidopsis thaliana protein
match is: Disease resistance protein (TIR-NBS-LRR class)
family (TAIR:AT4G16960.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16990"
/db_xref="Araport:AT4G16990"
intron_pos 269:1 (1/7)
intron_pos 305:2 (2/7)
intron_pos 340:1 (3/7)
intron_pos 410:2 (4/7)
intron_pos 468:1 (5/7)
intron_pos 508:1 (6/7)
intron_pos 596:2 (7/7)
BEGIN
1 MLENIAKDVS NKLFPPSNNF SDFVGIEAHI EALISMLRFD SKKARMIGIC GPSETGKTTI
61 GRALYSRLKS DFHHRAFVAY KRKIRSDYDQ KLYWEEQFLS EILCQKDIKI EECGAVEQRL
121 KHTKVLIVLD DVDDIELLKT LVGRIRWFGS ESKIVVITQK RELLKAHNIA HVYEVGFPSE
181 ELAHQMFCRY AFGKNSPPHG FNELADEAAK IAGNRPKALK YVGSSFRRLD KEQWVKMLSE
241 FRSNGNKLKI SYDELDGKGQ DYVACLTNGS NSQVKAEWIH LALGVSILLN IRSDGTTILK
301 HLSYNRSMAQ QAKIWWYENL ERVCKKYNIC GIDSSTDGGG STYGQCSNSQ FQRNMDASPG
361 GNKTSNQSTK DSPRASQVEK EKIEYCEPHV YITPAIFSDG TRAPKYVESS SRRVTQVHHA
421 KTWWPENCEK VYENHNNIYG IDRSIDGGDK FEGKSKVSDG GLDGKDQGSM YGQSSNSELQ
481 INMDADNRRC EPVSEMLFKN YNVCSPNAHM PAGLTDVNCS NPQSQRKLDA SLKKDKIVHE
541 WIRTGSGFFF DFQGPKSIVS AAQVDEKNFE YCEQGVYITL GILSGGIIVL KHLEFSRRMA
601 QQAKVWWSEN WIKVYQEHNI CGIDKSFDGR FDDRRVIRQL RPN
//