LOCUS AEE83831.1 670 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana disease resistance protein (TIR-NBS
class) protein.
ACCESSION CP002687-2864
PROTEIN_ID AEE83831.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RLM3"
/locus_tag="AT4G16990"
/gene_synonym="DL4525W"
/gene_synonym="FCAALL.324"
/gene_synonym="RESISTANCE TO LEPTOSPHAERIA MACULANS 3"
/inference="Similar to RNA sequence,
EST:INSD:AV810609.1,INSD:AV808334.1,INSD:AV802566.1,
INSD:EH846020.1,INSD:EL089729.1,INSD:AV796210.1,
INSD:AV529237.1,INSD:AU239285.2,INSD:BP847737.1,
INSD:EL097977.1,INSD:AV523087.1,INSD:BP785252.1,
INSD:EL087212.1,INSD:AV813097.1,INSD:BP863322.1,
INSD:EG466149.1,INSD:AU230575.1,INSD:AV826763.1,
INSD:EG513532.1,INSD:BP562591.1,INSD:EH947467.1,
INSD:AV814959.1,INSD:EH978678.1,INSD:BP637977.1,
INSD:EL185131.1,INSD:EL065731.1,INSD:AV809355.1,
INSD:ES444478.1,INSD:BP660470.1,INSD:EL202223.1,
INSD:EL191614.1,INSD:AV814911.1,INSD:EH983019.1,
INSD:AV810516.1,INSD:EL113676.1,INSD:EH927383.1,
INSD:EH822456.1,INSD:EH887611.1,INSD:EL224640.1,
INSD:EL327875.1,INSD:EG458632.1,INSD:EG513531.1,
INSD:AV565063.1,INSD:EL142879.1,INSD:EL216720.1,
INSD:EH813532.1,INSD:BP858235.1,INSD:EH882470.1,
INSD:EH980386.1,INSD:BP780257.1,INSD:EL076946.1,
INSD:ES444476.1,INSD:ES444477.1,INSD:AV529747.1,
INSD:AI997546.1,INSD:EL173478.1,INSD:EH893597.1,
INSD:EL224899.1,INSD:EL234448.1,INSD:EL114505.1,
INSD:EL071413.1,INSD:EH856581.1,INSD:BP863756.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK230430.1"
/note="RESISTANCE TO LEPTOSPHAERIA MACULANS 3 (RLM3);
FUNCTIONS IN: transmembrane receptor activity, ATP
binding; INVOLVED IN: defense response to fungus,
incompatible interaction, regulation of defense response
by callose deposition, defense response; LOCATED IN:
intrinsic to membrane; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease
resistance/zinc finger/chromosome condensation-like region
(InterPro:IPR013591), Disease resistance protein
(InterPro:IPR000767), Toll-Interleukin receptor
(InterPro:IPR000157); BEST Arabidopsis thaliana protein
match is: disease resistance protein (TIR-NBS-LRR class),
putative (TAIR:AT4G16890.1); Has 6513 Blast hits to 6293
proteins in 179 species: Archae - 0; Bacteria - 4; Metazoa
- 2; Fungi - 0; Plants - 6507; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16990"
/db_xref="Araport:AT4G16990"
intron_pos 153:2 (1/6)
intron_pos 427:1 (2/6)
intron_pos 463:2 (3/6)
intron_pos 498:1 (4/6)
intron_pos 568:2 (5/6)
intron_pos 625:1 (6/6)
BEGIN
1 MKSSSSQSYD VFPNFRGEDV RHSLVSHLRK ELDRKFINTF NDNRIERSRK ITPELLLAIE
61 NSRISLVVFS KNYASSTWCL DELVKIQECY EKLDQMVIPI FYKVDPSHVR KQTGEFGMVF
121 GETCKGRTEN EKRKWMRALA EVAHLAGEDL RNWRSEAEML ENIAKDVSNK LFPPSNNFSD
181 FVGIEAHIEA LISMLRFDSK KARMIGICGP SETGKTTIGR ALYSRLKSDF HHRAFVAYKR
241 KIRSDYDQKL YWEEQFLSEI LCQKDIKIEE CGAVEQRLKH TKVLIVLDDV DDIELLKTLV
301 GRIRWFGSES KIVVITQKRE LLKAHNIAHV YEVGFPSEEL AHQMFCRYAF GKNSPPHGFN
361 ELADEAAKIA GNRPKALKYV GSSFRRLDKE QWVKMLSEFR SNGNKLKISY DELDGKGQDY
421 VACLTNGSNS QVKAEWIHLA LGVSILLNIR SDGTTILKHL SYNRSMAQQA KIWWYENLER
481 VCKKYNICGI DSSTDGGGST YGQCSNSQFQ RNMDASPGGN KTSNQSTKDS PRASQVEKEK
541 IEYCEPHVYI TPAIFSDGTR APKYVESSRR VTQVHHAKTW WPENCEKVYE NHNNIYGIDR
601 SIDGGDKFEG KSKVSDGGLD GKDQGSMYGQ SSNSELQINM DADNRRCEPV SEMLFKNYNV
661 CSPNGKGSDI
//