LOCUS AEE83811.1 345 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Hyaluronan / mRNA binding family protein.
ACCESSION CP002687-2803
PROTEIN_ID AEE83811.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16830"
/gene_synonym="DL4440W"
/gene_synonym="FCAALL.13"
/inference="Similar to RNA sequence,
EST:INSD:AV781467.1,INSD:EL286066.1,INSD:EL160440.1,
INSD:EL040192.1,INSD:EL114635.1,INSD:EL219746.1,
INSD:BP600039.1,INSD:EL111050.1,INSD:AV800317.1,
INSD:AV539012.1,INSD:EL045114.1,INSD:EL291103.1,
INSD:EH805396.1,INSD:EH973206.1,INSD:T76589.1,
INSD:EL111803.1,INSD:EL323980.1,INSD:EL290696.1,
INSD:EH831648.1,INSD:BE525507.1,INSD:DR359627.1,
INSD:EL244855.1,INSD:EH860515.1,INSD:AV534435.1,
INSD:EL045077.1,INSD:AV785288.1,INSD:EL157237.1,
INSD:EH881604.1,INSD:AV525221.1,INSD:EL217001.1,
INSD:EL315948.1,INSD:EL000381.1,INSD:EH936666.1,
INSD:EL187473.1,INSD:EH963534.1,INSD:ES087462.1,
INSD:EL100667.1,INSD:EH867282.1,INSD:EL245840.1,
INSD:DR297619.1,INSD:BP657906.1,INSD:DR359628.1,
INSD:DR211496.1,INSD:Z32590.1,INSD:AV541920.1,
INSD:EL000541.1,INSD:EG520886.1,INSD:EL301681.1,
INSD:EH850665.1,INSD:BG459319.1,INSD:EH896085.1,
INSD:ES026570.1,INSD:EL171797.1,INSD:EL073530.1,
INSD:EL175961.1,INSD:ES117413.1,INSD:EL010266.1,
INSD:EH990560.1,INSD:EL077782.1,INSD:EL121475.1,
INSD:ES132002.1,INSD:DR381390.1,INSD:EL015272.1,
INSD:EG520887.1,INSD:ES138596.1,INSD:BP833713.2,
INSD:ES071418.1,INSD:EL102898.1,INSD:BP601155.1,
INSD:EL048147.1,INSD:BP783879.1,INSD:AV518423.1,
INSD:BP600698.1,INSD:DR370085.1,INSD:ES137223.1,
INSD:EH995128.1,INSD:EH836605.1,INSD:EL147125.1,
INSD:DR378897.1,INSD:BP636252.1,INSD:AV537813.1,
INSD:EL268631.1,INSD:BP618924.1,INSD:EL189913.1,
INSD:EH797197.1,INSD:AV540643.1,INSD:EL301127.1,
INSD:DR380107.1,INSD:AV807311.1,INSD:EL016167.1,
INSD:EH795567.1,INSD:BP606457.1,INSD:ES049368.1"
/note="Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Hyaluronan/mRNA-binding protein
(InterPro:IPR006861); BEST Arabidopsis thaliana protein
match is: Hyaluronan / mRNA binding family
(TAIR:AT4G17520.1); Has 21958 Blast hits to 10880 proteins
in 1019 species: Archae - 12; Bacteria - 7276; Metazoa -
6848; Fungi - 1552; Plants - 2999; Viruses - 314; Other
Eukaryotes - 2957 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16830"
/db_xref="Araport:AT4G16830"
intron_pos 49:2 (1/6)
intron_pos 150:2 (2/6)
intron_pos 172:2 (3/6)
intron_pos 215:0 (4/6)
intron_pos 267:0 (5/6)
intron_pos 284:0 (6/6)
BEGIN
1 MMMLRIQASS LLPSRRLISP RNLDRFRACL LSQLLSFHRS HFLLLKPVRE ARSDAPRGGG
61 GRGGFNRGRG GYNRDDGNNG YSGGYTKPSG EGDVSKSSYE RRGGGGAPRG SFRGEGGGPG
121 GGRRGGFSNE GGDGERPRRA FERRSGTGRG SDFKRDGSGR GNWGTPGEEI AAETEAVAGV
181 ETEKDVGEKP AVDDVAADAN KEDTVVEEKE PEDKEMTLDE YEKILEEKKK ALQSLTTSER
241 KVDTKVFESM QQLSNKKSND EIFIKLGSDK DKRKDDKEEK AKKAVSINEF LKPAEGGNYY
301 RGGRGGRGRG GRGRGGVSSG ESGGYRNEAA PAIGDAAQFP SLGGK
//