LOCUS AEE83810.1 265 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Hyaluronan / mRNA binding family protein.
ACCESSION CP002687-2804
PROTEIN_ID AEE83810.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16830"
/gene_synonym="DL4440W"
/gene_synonym="FCAALL.13"
/inference="Similar to RNA sequence,
EST:INSD:EL286066.1,INSD:AV781467.1,INSD:EL111050.1,
INSD:AV800317.1,INSD:AV521106.2,INSD:EL291103.1,
INSD:EH805396.1,INSD:T76589.1,INSD:EL290696.1,
INSD:EH831648.1,INSD:BE525507.1,INSD:EL045077.1,
INSD:EL157237.1,INSD:DR359630.1,INSD:EL315948.1,
INSD:EH936666.1,INSD:EL000381.1,INSD:DR297618.1,
INSD:DR297616.1,INSD:BP840647.2,INSD:BP657906.1,
INSD:Z32590.1,INSD:EL000541.1,INSD:BG459319.1,
INSD:EH896085.1,INSD:EL171797.1,INSD:BP802212.1,
INSD:AI993282.1,INSD:ES117413.1,INSD:EL121475.1,
INSD:EL077782.1,INSD:DR381390.1,INSD:EG520887.1,
INSD:DR297621.1,INSD:EL102898.1,INSD:BP601155.1,
INSD:BP783879.1,INSD:AV518423.1,INSD:BP600698.1,
INSD:EH836605.1,INSD:Z32589.1,INSD:EL268631.1,
INSD:AV537813.1,INSD:EL189913.1,INSD:EH797197.1,
INSD:EL301127.1,INSD:AV540643.1,INSD:DR380107.1,
INSD:EH795567.1,INSD:EL160440.1,INSD:EL040192.1,
INSD:EL114635.1,INSD:BP600039.1,INSD:AV539012.1,
INSD:EL045114.1,INSD:BP841277.2,INSD:EL111803.1,
INSD:EL323980.1,INSD:EL244855.1,INSD:EH860515.1,
INSD:AV534435.1,INSD:AV785288.1,INSD:EH881604.1,
INSD:EL217001.1,INSD:DR297617.1,INSD:BP838010.2,
INSD:EH963534.1,INSD:EL100667.1,INSD:ES087462.1,
INSD:EH867282.1,INSD:EL245840.1,INSD:BP802590.1,
INSD:DR211496.1,INSD:EL301681.1,INSD:EG520886.1,
INSD:AV541920.1,INSD:ES026570.1,INSD:ES202989.1,
INSD:EL175961.1,INSD:EL073530.1,INSD:EH990560.1,
INSD:EL010266.1,INSD:EL015272.1,INSD:ES138596.1,
INSD:BP833713.2,INSD:ES071418.1,INSD:ES137223.1,
INSD:DR370085.1,INSD:EL147125.1,INSD:EH995128.1,
INSD:BP636252.1,INSD:DR378897.1,INSD:BP618924.1,
INSD:EL016167.1,INSD:AV807311.1,INSD:BP830941.2,
INSD:BP606457.1,INSD:ES049368.1"
/note="Hyaluronan / mRNA binding family; CONTAINS InterPro
DOMAIN/s: Hyaluronan/mRNA-binding protein
(InterPro:IPR006861); BEST Arabidopsis thaliana protein
match is: Hyaluronan / mRNA binding family
(TAIR:AT4G17520.1); Has 1174 Blast hits to 1093 proteins
in 244 species: Archae - 2; Bacteria - 52; Metazoa - 515;
Fungi - 125; Plants - 182; Viruses - 23; Other Eukaryotes
- 275 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16830"
/db_xref="Araport:AT4G16830"
intron_pos 51:0 (1/6)
intron_pos 70:2 (2/6)
intron_pos 92:2 (3/6)
intron_pos 135:0 (4/6)
intron_pos 187:0 (5/6)
intron_pos 204:0 (6/6)
BEGIN
1 MLHVVVEAVE DLTVVVVVTT VMMVTMDIQG DTLNPQVKEM FQSLLTRGVA GGDGERPRRA
61 FERRSGTGRG SDFKRDGSGR GNWGTPGEEI AAETEAVAGV ETEKDVGEKP AVDDVAADAN
121 KEDTVVEEKE PEDKEMTLDE YEKILEEKKK ALQSLTTSER KVDTKVFESM QQLSNKKSND
181 EIFIKLGSDK DKRKDDKEEK AKKAVSINEF LKPAEGGNYY RGGRGGRGRG GRGRGGVSSG
241 ESGGYRNEAA PAIGDAAQFP SLGGK
//