LOCUS AEE83809.1 355 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Hyaluronan / mRNA binding family protein.
ACCESSION CP002687-2802
PROTEIN_ID AEE83809.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16830"
/gene_synonym="DL4440W"
/gene_synonym="FCAALL.13"
/inference="Similar to RNA sequence,
EST:INSD:EL286066.1,INSD:AV781467.1,INSD:EL219746.1,
INSD:AV549840.1,INSD:EL111050.1,INSD:AV800317.1,
INSD:AV521106.2,INSD:EL291103.1,INSD:EH805396.1,
INSD:T76589.1,INSD:DR297620.1,INSD:EH831648.1,
INSD:EL290696.1,INSD:BE525507.1,INSD:EL045077.1,
INSD:EL157237.1,INSD:DR359630.1,INSD:EL315948.1,
INSD:EH936666.1,INSD:EL000381.1,INSD:DR297618.1,
INSD:DR297616.1,INSD:BP840647.2,INSD:BP657906.1,
INSD:Z32590.1,INSD:EL000541.1,INSD:EH896085.1,
INSD:BG459319.1,INSD:EL171797.1,INSD:BP802212.1,
INSD:AI993282.1,INSD:ES117413.1,INSD:EL121475.1,
INSD:EL077782.1,INSD:DR381390.1,INSD:AV829672.1,
INSD:EG520887.1,INSD:DR298321.1,INSD:DR297621.1,
INSD:EL102898.1,INSD:BP601155.1,INSD:BP783879.1,
INSD:AV518423.1,INSD:BP600698.1,INSD:EH836605.1,
INSD:Z32589.1,INSD:AV537813.1,INSD:EL268631.1,
INSD:EL189913.1,INSD:EH797197.1,INSD:AV540643.1,
INSD:EL301127.1,INSD:DR380107.1,INSD:AV828079.1,
INSD:EH795567.1,INSD:EL160440.1,INSD:EL040192.1,
INSD:EL114635.1,INSD:BP600039.1,INSD:AV539012.1,
INSD:EL045114.1,INSD:BP841277.2,INSD:AV824130.1,
INSD:EH973206.1,INSD:R30062.1,INSD:EL111803.1,
INSD:EL323980.1,INSD:DR298322.1,INSD:EL244855.1,
INSD:EH860515.1,INSD:AV534435.1,INSD:AV785288.1,
INSD:EH881604.1,INSD:DR297617.1,INSD:EL217001.1,
INSD:BP838010.2,INSD:EL187473.1,INSD:EH963534.1,
INSD:EL100667.1,INSD:ES087462.1,INSD:EH867282.1,
INSD:EL245840.1,INSD:BP802590.1,INSD:DR211496.1,
INSD:AV541920.1,INSD:EG520886.1,INSD:EL301681.1,
INSD:EH850665.1,INSD:ES026570.1,INSD:ES202989.1,
INSD:EL175961.1,INSD:EL073530.1,INSD:EL010266.1,
INSD:EH990560.1,INSD:ES132002.1,INSD:EL015272.1,
INSD:ES138596.1,INSD:BP833713.2,INSD:ES071418.1,
INSD:EL048147.1,INSD:DR370085.1,INSD:ES137223.1,
INSD:EL147125.1,INSD:EH995128.1,INSD:AI994595.1,
INSD:DR378897.1,INSD:BP636252.1,INSD:BP618924.1,
INSD:EL016167.1,INSD:AV807311.1,INSD:BP830941.2,
INSD:BP606457.1,INSD:ES049368.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY096500.1,INSD:BX827515.1,INSD:AY063896.1,
INSD:AY084828.1,INSD:BT000559.1,INSD:AY127018.1"
/note="Hyaluronan / mRNA binding family; CONTAINS InterPro
DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084),
Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST
Arabidopsis thaliana protein match is: Hyaluronan / mRNA
binding family (TAIR:AT4G17520.1); Has 23191 Blast hits to
11934 proteins in 1060 species: Archae - 16; Bacteria -
7670; Metazoa - 7282; Fungi - 1721; Plants - 3144; Viruses
- 315; Other Eukaryotes - 3043 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16830"
/db_xref="Araport:AT4G16830"
intron_pos 58:1 (1/6)
intron_pos 160:2 (2/6)
intron_pos 182:2 (3/6)
intron_pos 225:0 (4/6)
intron_pos 277:0 (5/6)
intron_pos 294:0 (6/6)
BEGIN
1 MATLNPFDLL DDDAEDPSQL AVAIEKIDKS KKSGQVSSLP AKSAPKLPSK PLPPAQAVRE
61 ARSDAPRGGG GRGGFNRGRG GYNRDDGNNG YSGGYTKPSG EGDVSKSSYE RRGGGGAPRG
121 SFRGEGGGPG GGRRGGFSNE GGDGERPRRA FERRSGTGRG SDFKRDGSGR GNWGTPGEEI
181 AAETEAVAGV ETEKDVGEKP AVDDVAADAN KEDTVVEEKE PEDKEMTLDE YEKILEEKKK
241 ALQSLTTSER KVDTKVFESM QQLSNKKSND EIFIKLGSDK DKRKDDKEEK AKKAVSINEF
301 LKPAEGGNYY RGGRGGRGRG GRGRGGVSSG ESGGYRNEAA PAIGDAAQFP SLGGK
//