LOCUS AEE83778.1 789 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEA(D/H)-box RNA helicase family
protein protein.
ACCESSION CP002687-2754
PROTEIN_ID AEE83778.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16630"
/gene_synonym="DL4340C"
/gene_synonym="FCAALL.424"
/inference="Similar to RNA sequence,
EST:INSD:T88504.1,INSD:ES096750.1,INSD:AU236230.1,
INSD:ES080865.1,INSD:ES021491.1,INSD:ES162802.1,
INSD:AV440627.1,INSD:BP780359.1,INSD:ES027301.1,
INSD:ES071330.1,INSD:ES022457.1,INSD:EH886841.1,
INSD:AV528763.1,INSD:ES011757.1,INSD:AI099579.1,
INSD:EH806865.1,INSD:ES016697.1,INSD:Z18021.1,
INSD:EH905257.1,INSD:EH871136.1,INSD:EH893705.1,
INSD:AV523149.1,INSD:ES200470.1,INSD:ES173124.1,
INSD:EL041224.1,INSD:ES130691.1,INSD:AV442255.1,
INSD:BP786484.1,INSD:ES136397.1,INSD:CA782065.1,
INSD:AI998487.1,INSD:ES160486.1,INSD:ES164009.1,
INSD:BP786699.1,INSD:AU227068.1,INSD:EL198463.1,
INSD:Z26774.1,INSD:ES016384.1,INSD:ES033061.1,
INSD:BP795576.1,INSD:ES098910.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK228353.1,INSD:AJ010475.1"
/note="DEA(D/H)-box RNA helicase family protein; FUNCTIONS
IN: helicase activity, ATP binding, ATP-dependent helicase
activity, nucleic acid binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q
motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH
box type, N-terminal (InterPro:IPR011545), RNA helicase,
ATP-dependent, DEAD-box, conserved site
(InterPro:IPR000629), DEAD-like helicase, N-terminal
(InterPro:IPR014001), DNA/RNA helicase, C-terminal
(InterPro:IPR001650), Helicase, superfamily 1/2,
ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis
thaliana protein match is: DEA(D/H)-box RNA helicase
family protein (TAIR:AT5G60990.1); Has 91788 Blast hits to
67613 proteins in 3461 species: Archae - 858; Bacteria -
34733; Metazoa - 21444; Fungi - 9002; Plants - 4280;
Viruses - 615; Other Eukaryotes - 20856 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G16630"
/db_xref="Araport:AT4G16630"
intron_pos 133:0 (1/18)
intron_pos 195:0 (2/18)
intron_pos 218:0 (3/18)
intron_pos 253:2 (4/18)
intron_pos 280:0 (5/18)
intron_pos 338:0 (6/18)
intron_pos 387:2 (7/18)
intron_pos 419:2 (8/18)
intron_pos 454:0 (9/18)
intron_pos 475:0 (10/18)
intron_pos 495:2 (11/18)
intron_pos 528:0 (12/18)
intron_pos 567:2 (13/18)
intron_pos 582:0 (14/18)
intron_pos 616:0 (15/18)
intron_pos 647:0 (16/18)
intron_pos 687:0 (17/18)
intron_pos 785:2 (18/18)
BEGIN
1 MPSSFFFEDA SDDELELIRN QEDSSEEDVK EGEAEEHEAG EDEDGEEEYE EEDDDEEEED
61 EKRKRDADAQ SPWDFASYSS SVGEEHARRH TTSIDEKISK AIQHRPVPIS INEEEEEEEE
121 EEDASDAETD KQEEYLSEDD EAAEYKPEDA TPKPFFSTVD GVSFHADTFM ELNLSRPLLR
181 ACETLGYKKP TPIQAACIPL ALTGRDLCAS AITGSGKTAA FALPTLERLL FRPKRVFATR
241 VLILTPTREL AVQIHSMIQN LAQFTDIKCG LIVGGLSVRE QEVVLRSMPD IVVATPGRMI
301 DHLRNSMSVD LDDLAVLILD EADRLLQTGF ATEITELVRL CPKRRQTMLF SATMTEEVKE
361 LVKLSLNKPL RLSADPSARR PPGLTEEVVR IRRTREANQE AVLLSLCTRT FKSKVIIFSG
421 TKQAAHRLKI LFGLAGLKAA ELHGNLTQAQ RLDSLELFRK QEVDFLIATD VAARGLDIIG
481 VQTVINYACP REIDSYVHRV GRTARAGREG YAVTFVTDSD RSLLKVIAKK VGSKLKSRVI
541 PEQSIVKWSQ IIDEMEDQYS AVISAERDER ALRKAEMEFA KAENMLEHRD EIYARPKRTW
601 FMTEKEKKLV AQAEKDSAGN PAGGELVSAD RAEDLKMKEK RKREREKNLP RKKRRKLEAA
661 REMLEDNEGE EEEEDEEGDE KRGRSRGKDK KKQETDKKGL TLKDLGYMRA KAVKAKQRAI
721 DSGKMERPKP DKKQSRSKPR NQPRGEEMKD LFKSDMGEKK QGRGGAAAAA KPRTKSKNSF
781 KSKARYKRR
//