LOCUS AEE83765.1 121 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin-like superfamily protein protein.
ACCESSION CP002687-2729
PROTEIN_ID AEE83765.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ATG8F"
/locus_tag="AT4G16520"
/gene_synonym="autophagy 8f"
/gene_synonym="DL4285C"
/gene_synonym="FCAALL.383"
/inference="Similar to RNA sequence,
EST:INSD:BP634358.1,INSD:EL235379.1,INSD:EH992390.1,
INSD:EL970890.1,INSD:BP626885.1,INSD:EL074166.1,
INSD:EH983086.1,INSD:EL004731.1,INSD:BP631615.1,
INSD:EH820111.1,INSD:EL033707.1,INSD:CF773046.1,
INSD:ES042357.1,INSD:BP623846.1,INSD:EH916129.1,
INSD:BP621961.1,INSD:BP597967.1,INSD:EH938862.1,
INSD:BP601878.1,INSD:EL189815.1,INSD:EL304370.1,
INSD:BP624718.1,INSD:BP671076.1,INSD:EH887386.1,
INSD:EL101463.1,INSD:BP636453.1,INSD:CB260470.1,
INSD:ES054001.1,INSD:BP646210.1,INSD:EL192481.1,
INSD:EH846624.1,INSD:ES125465.1,INSD:BP586615.1,
INSD:BP605372.1,INSD:AV806407.1,INSD:ES097707.1,
INSD:BP627044.1,INSD:EH900041.1,INSD:ES047813.1,
INSD:BP598233.1,INSD:ES163051.1,INSD:ES191088.1,
INSD:EL038687.1,INSD:EL338545.1,INSD:ES077858.1,
INSD:BP633849.1,INSD:ES196092.1,INSD:BP636422.1,
INSD:EL042260.1,INSD:ES180102.1,INSD:EL078930.1,
INSD:BP624131.1,INSD:AA597757.1,INSD:BP623271.1,
INSD:ES031930.1,INSD:ES144364.1,INSD:EL068001.1,
INSD:BP629111.1,INSD:ES088438.1,INSD:EL994547.1,
INSD:EH865700.1,INSD:BP666465.1,INSD:ES043281.1,
INSD:ES051623.1,INSD:AV799207.1,INSD:ES129582.1,
INSD:EL127116.1,INSD:ES025014.1,INSD:BP669235.1,
INSD:BP623893.1,INSD:ES097107.1,INSD:BP622709.1,
INSD:EH808207.1,INSD:EL159250.1,INSD:BP601768.1,
INSD:BP635029.1,INSD:BP623344.1,INSD:ES198769.1,
INSD:T75940.1,INSD:ES169835.1,INSD:EL180013.1,
INSD:AV533623.1,INSD:BP656517.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY091667.1"
/note="autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s:
Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis
thaliana protein match is: Ubiquitin-like superfamily
protein (TAIR:AT3G60640.1); Has 1518 Blast hits to 1516
proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa
- 724; Fungi - 178; Plants - 302; Viruses - 3; Other
Eukaryotes - 311 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16520"
/db_xref="Araport:AT4G16520"
intron_pos 13:1 (1/4)
intron_pos 32:0 (2/4)
intron_pos 49:2 (3/4)
intron_pos 89:1 (4/4)
BEGIN
1 MAKSSFKQEH DLEKRRAEAA RIREKYPDRI PVIVEKAEKS DIPTIDKKKY LVPADLTVGQ
61 FVYVIRKRIK LSAEKAIFIF VDNVLPPAGA LMSSVYEEKK DDDGFLYVTY SGENTFGFGS
121 P
//