LOCUS AEE83727.1 505 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana flowering time control protein FCA protein.
ACCESSION CP002687-2680
PROTEIN_ID AEE83727.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="FCA"
/locus_tag="AT4G16280"
/gene_synonym="BETA"
/gene_synonym="DELTA AND GAMMA"
/gene_synonym="DL4180C"
/gene_synonym="FCAALL.331"
/gene_synonym="FLOWERING TIME CONTROL PROTEIN FCA ALPHA"
/inference="Similar to RNA sequence,
EST:INSD:DR292619.1,INSD:AV442372.1,INSD:DR292617.1,
INSD:DR292621.1,INSD:ES185158.1,INSD:T42029.1,
INSD:DR292620.1,INSD:EL184333.1,INSD:ES078184.1,
INSD:ES115727.1,INSD:AW004349.1,INSD:DR292622.1,
INSD:DR292618.1,INSD:DR292623.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842313.1,INSD:Z82991.1,INSD:Z82993.1,
INSD:BX829319.1"
/note="FCA; CONTAINS InterPro DOMAIN/s: RNA recognition
motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein,
BRUNO-like (InterPro:IPR015903), WW/Rsp5/WWP
(InterPro:IPR001202), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: flowering time control protein-related / FCA
gamma-related (TAIR:AT2G47310.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G16280"
/db_xref="Araport:AT4G16280"
intron_pos 10:1 (1/13)
intron_pos 37:0 (2/13)
intron_pos 58:2 (3/13)
intron_pos 78:2 (4/13)
intron_pos 133:0 (5/13)
intron_pos 161:0 (6/13)
intron_pos 317:0 (7/13)
intron_pos 377:0 (8/13)
intron_pos 437:0 (9/13)
intron_pos 448:0 (10/13)
intron_pos 459:0 (11/13)
intron_pos 470:0 (12/13)
intron_pos 492:0 (13/13)
BEGIN
1 MRDEYRQSRG CGFVKYSSKE TAMAAIDGLN GTYTMRGCNQ PLIVRFAEPK RPKPGESREM
61 APPVGLGSGP RFQASGPRPT SNFGDSSGDV SHTNPWRPAT SRNVGPPSNT GIRGAGSDFS
121 PKPGQATLPS NQGGPLGGYG VPPLNPLPVP GVSSSATLQQ QNRAAGQHIT PLKKPLHSPQ
181 GLPLPLRPQT NFPGAQAPLQ NPYAYSSQLP TSQLPPQQNI SRATAPQTPL NINLRPTTVS
241 SATVQFPPRS QQQPLQKMQH PPSELAQLLS QQTQSLQATF QSSQQAISQL QQQVQSMQQP
301 NQNLPLSQNG RAGKQQWAGS AIPRVASTTG STPVSYVQTA APAVSQSVGS VKCTWTEHTS
361 PDGFKYYYNG LTGESKWEKP EEMIVFEREQ QKQQQHQEKP TIQQSQTQLQ PLQQQPQQVQ
421 QQYQGQQLQQ PFYSSLYPTP GASHNTQYPS LPVGQNSQFP MSGIGQNAQD YARTHIPVGA
481 ASMNDISRTQ QSRQSPQELM WKNKA
//