LOCUS AEE83726.1 533 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana flowering time control protein FCA protein.
ACCESSION CP002687-2681
PROTEIN_ID AEE83726.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="FCA"
/locus_tag="AT4G16280"
/gene_synonym="BETA"
/gene_synonym="DELTA AND GAMMA"
/gene_synonym="DL4180C"
/gene_synonym="FCAALL.331"
/gene_synonym="FLOWERING TIME CONTROL PROTEIN FCA ALPHA"
/inference="Similar to RNA sequence,
EST:INSD:DR292619.1,INSD:T42029.1,INSD:ES078184.1,
INSD:ES115727.1,INSD:DR292622.1,INSD:DR292618.1,
INSD:DR292623.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX829319.1"
/note="FCA; CONTAINS InterPro DOMAIN/s: RNA recognition
motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein,
BRUNO-like (InterPro:IPR015903), Paraneoplastic
encephalomyelitis antigen (InterPro:IPR002343),
Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
BEST Arabidopsis thaliana protein match is: flowering time
control protein-related / FCA gamma-related
(TAIR:AT2G47310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16280"
/db_xref="Araport:AT4G16280"
intron_pos 112:1 (1/13)
intron_pos 136:0 (2/13)
intron_pos 162:1 (3/13)
intron_pos 190:0 (4/13)
intron_pos 207:1 (5/13)
intron_pos 230:0 (6/13)
intron_pos 252:1 (7/13)
intron_pos 279:0 (8/13)
intron_pos 300:2 (9/13)
intron_pos 320:2 (10/13)
intron_pos 375:0 (11/13)
intron_pos 403:0 (12/13)
intron_pos 534:0 (13/13)
BEGIN
1 MNGPPDRVDF KPMGPHHGGS FRPMGFAYDD GFRPMGPNGG VGGEGTRSIV GARYNYPAKY
61 PPSESPDRRR FIGKAMESDY SVRPTTPPVQ QPLSGQKRGY PISDHGSFTG TDVSDRSSTV
121 KLFVGSVPRT ATEEEIRPYF EQHGNVLEVA LIKDKRTGQQ QGCCFVKYAT SKDADRAIRA
181 LHNQITLPGG TGPVQVRYAD GERERIGTLE FKLFVGSLNK QATEKEVEEI FLQFGHVEDV
241 YLMRDEYRQS RGCGFVKYSS KETAMAAIDG LNGTYTMRGC NQPLIVRFAE PKRPKPGESR
301 EMAPPVGLGS GPRFQASGPR PTSNFGDSSG DVSHTNPWRP ATSRNVGPPS NTGIRGAGSD
361 FSPKPGQATL PSNQGGPLGG YGVPPLNPLP VPGVSSSATL QQQNRAAGQH ITPLKKPLHS
421 PQGLPLPLRP QTNFPGAQAP LQNPYAYSSQ LPTSQLPPQQ NISRATAPQT PLNINLRPTT
481 VSSATVQFPP RSQQQPLQKM QHPPSELAQL LSQQTQSLQA TFQSSQQAIS QLQ
//