LOCUS AEE83722.1 344 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase superfamily protein
protein.
ACCESSION CP002687-2673
PROTEIN_ID AEE83722.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16260"
/gene_synonym="DL4170C"
/gene_synonym="FCAALL.386"
/inference="Similar to RNA sequence,
EST:INSD:AV551509.1,INSD:DR237972.1,INSD:DR237970.1,
INSD:DR237973.1,INSD:DR251928.1,INSD:DR237980.1,
INSD:AV541147.1,INSD:AV550287.1,INSD:BP625493.1,
INSD:EG514709.1,INSD:DR237982.1,INSD:DR251935.1,
INSD:EG456638.1,INSD:AV538835.1,INSD:AV541953.1,
INSD:AV552770.1,INSD:EG521999.1,INSD:DR237985.1,
INSD:AV553879.1,INSD:DR251934.1,INSD:AV543502.1,
INSD:AV538432.1,INSD:DR237983.1,INSD:EG425175.1,
INSD:BP633822.1,INSD:DR237975.1,INSD:DR251946.1,
INSD:AV538137.1,INSD:BP849589.1,INSD:EL144316.1,
INSD:DR237981.1,INSD:DR251933.1,INSD:DR251930.1,
INSD:AV539126.1,INSD:AV544152.1,INSD:F14297.1,
INSD:DR251939.1,INSD:DR251944.1,INSD:BP803916.1,
INSD:DR251943.1,INSD:BP627336.1,INSD:AV544074.1,
INSD:BP629930.1,INSD:DR237976.1,INSD:AI994827.1,
INSD:AV541294.1,INSD:EG456637.1,INSD:DR251932.1,
INSD:DR251945.1,INSD:AV549026.1,INSD:DR251937.1,
INSD:DR251931.1,INSD:AV542658.1,INSD:DR251947.1,
INSD:AV543362.1,INSD:BP663099.1,INSD:AV539986.1,
INSD:T20919.1,INSD:AV827847.1,INSD:DR251949.1,
INSD:AV543026.1,INSD:DR237977.1,INSD:Z34104.1,
INSD:T88133.1,INSD:AV551714.1,INSD:AV539840.1,
INSD:DR237984.1,INSD:BP849230.1,INSD:BP632907.1,
INSD:DR376993.1,INSD:AV543077.1,INSD:DR370520.1,
INSD:BP563213.1,INSD:AV543271.1,INSD:AV799611.1,
INSD:AV541286.1,INSD:DR251948.1,INSD:DR237978.1,
INSD:CB185774.2,INSD:BP577301.1,INSD:DR237971.1,
INSD:EL228443.1,INSD:DR251936.1,INSD:EG514167.1,
INSD:BP608495.1,INSD:BP618670.1,INSD:DR251941.1,
INSD:DR251942.1,INSD:AV552540.1,INSD:AV550709.1,
INSD:AV539860.1,INSD:AV541231.1,INSD:AV552625.1,
INSD:AA598002.1,INSD:AV537293.1,INSD:N65329.1,
INSD:AV553619.1,INSD:BP627370.1,INSD:AA597917.1,
INSD:DR251940.1,INSD:DR237974.1,INSD:DR371237.1,
INSD:EG522004.1,INSD:BP670152.1,INSD:AV549325.1,
INSD:EG523562.1,INSD:DR251929.1,INSD:AV550750.1,
INSD:BP859806.1,INSD:DR304576.1,INSD:AV788371.1,
INSD:AV541668.1,INSD:DR251938.1,INSD:AV542132.1,
INSD:DR251927.1,INSD:BP793303.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY087106.1,INSD:AY143867.1,INSD:AY064130.1"
/note="Glycosyl hydrolase superfamily protein; FUNCTIONS
IN: cation binding, hydrolase activity, hydrolyzing
O-glycosyl compounds, catalytic activity; INVOLVED IN:
defense response to fungus, incompatible interaction,
response to salt stress; LOCATED IN: cell wall, plasma
membrane; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, LP.08 eight leaves visible; CONTAINS InterPro
DOMAIN/s: Glycoside hydrolase, catalytic core
(InterPro:IPR017853), Glycoside hydrolase, family 17
(InterPro:IPR000490), Glycoside hydrolase, subgroup,
catalytic core (InterPro:IPR013781); BEST Arabidopsis
thaliana protein match is: beta-1,3-glucanase 1
(TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins
in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5;
Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink)."
/db_xref="TAIR:AT4G16260"
/db_xref="Araport:AT4G16260"
intron_pos 20:1 (1/2)
intron_pos 181:2 (2/2)
BEGIN
1 MTTLFLLIAL FITTILNPTS GESVGVCYGM MGNNLPSQSD TIALFRQNNI RRVRLYDPNQ
61 AALNALRNTG IEVIIGVPNT DLRSLTNPSS ARSWLQNNVL NYYPAVSFKY IAVGNEVSPS
121 NGGDVVLPAM RNVYDALRGA NLQDRIKVST AIDMTLIGNS FPPSSGEFRG DVRWYIDPVI
181 GFLTSTNSAL LANIYPYFSY VDNPRDISLS YALFTSPSVV VWDGSRGYQN LFDALLDVVY
241 SAVERSGGGS LPVVVSESGW PSNGGNAASF DNARAFYTNL ASRVRENRGT PKRPGRGVET
301 YLFAMFDENQ KSPEIEKNFG LFFPNKQPKF PITFSAARDG TAVE
//