LOCUS AEE83698.1 197 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GATA type zinc finger transcription
factor family protein protein.
ACCESSION CP002687-2645
PROTEIN_ID AEE83698.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G16141"
/gene_synonym="AtGATA17L"
/gene_synonym="GATA17-LIKE"
/gene_synonym="GATA17L"
/inference="Similar to RNA sequence,
EST:INSD:ES100762.1,INSD:AU226717.1,INSD:EL003060.1,
INSD:DR259739.1,INSD:EH829385.1,INSD:AI995731.1,
INSD:EL239488.1,INSD:BP663702.1,INSD:EL317710.1,
INSD:EH845587.1,INSD:EL127945.1,INSD:ES113833.1,
INSD:EL200730.1,INSD:EL967376.1,INSD:BP592682.1,
INSD:EH862928.1,INSD:EL980588.1,INSD:EH852810.1,
INSD:AV541009.1,INSD:DR259738.1,INSD:BP836694.1,
INSD:DR259740.1,INSD:AU235932.1,INSD:BP843917.1,
INSD:EH915999.1,INSD:ES197976.1,INSD:BP647470.1,
INSD:EH993485.1,INSD:AU239903.1,INSD:BE525685.1,
INSD:ES000410.1,INSD:AU231259.1,INSD:EL191680.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828853.1,INSD:AK119021.1,INSD:AK228025.1,
INSD:BX826853.1"
/note="GATA type zinc finger transcription factor family
protein; FUNCTIONS IN: sequence-specific DNA binding, zinc
ion binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger,
NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type
(InterPro:IPR000679); BEST Arabidopsis thaliana protein
match is: GATA transcription factor 17 (TAIR:AT3G16870.1);
Has 1652 Blast hits to 1613 proteins in 197 species:
Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 714;
Plants - 768; Viruses - 0; Other Eukaryotes - 62 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G16141"
/db_xref="Araport:AT4G16141"
intron_pos 59:0 (1/1)
BEGIN
1 MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW RGGPAGPKSL
61 CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV KTGKGEPVNV KIAKCEPGIV
121 KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK
181 LGEEERAAVL LMALSCG
//