LOCUS AEE83569.1 420 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana beta-amylase 5 protein.
ACCESSION CP002687-2437
PROTEIN_ID AEE83569.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="BAM5"
/locus_tag="AT4G15210"
/gene_synonym="ARABIDOPSIS THALIANA BETA-AMYLASE"
/gene_synonym="AT-BETA-AMY"
/gene_synonym="ATBETA-AMY"
/gene_synonym="beta-amylase 5"
/gene_synonym="BMY1"
/gene_synonym="DL3650C"
/gene_synonym="FCAALL.97"
/gene_synonym="RAM1"
/gene_synonym="REDUCED BETA AMYLASE 1"
/inference="Similar to RNA sequence,
EST:INSD:DR375511.1,INSD:ES150209.1,INSD:ES120261.1,
INSD:EL995859.1,INSD:ES068309.1,INSD:ES135399.1,
INSD:EL989936.1,INSD:EG505009.1,INSD:ES076883.1,
INSD:ES016580.1,INSD:BP830056.1,INSD:ES145149.1,
INSD:ES129152.1,INSD:BP826985.1,INSD:ES040570.1,
INSD:ES032110.1,INSD:BP629233.1,INSD:ES165798.1,
INSD:BP815455.1,INSD:ES156552.1,INSD:ES088923.1,
INSD:AV823222.1,INSD:BP586940.1,INSD:ES034593.1,
INSD:ES030896.1,INSD:BP833037.1,INSD:ES007375.1,
INSD:ES129043.1,INSD:ES126471.1,INSD:ES099762.1,
INSD:ES113935.1,INSD:ES140866.1,INSD:DR260146.1,
INSD:AV797070.1,INSD:AV817097.1,INSD:BP828296.1,
INSD:CK121669.1,INSD:ES129362.1,INSD:BP835013.1,
INSD:ES051884.1,INSD:AV555073.1,INSD:ES064980.1,
INSD:ES128181.1,INSD:ES069810.1,INSD:EL978812.1,
INSD:AV804721.1,INSD:BP650399.1,INSD:ES119876.1,
INSD:ES025110.1,INSD:ES076261.1,INSD:EL994437.1,
INSD:ES003066.1,INSD:AV803058.1,INSD:BP815034.1,
INSD:BP840805.1,INSD:ES205133.1,INSD:DR260145.1,
INSD:ES179537.1,INSD:ES028755.1,INSD:BP640207.1,
INSD:ES156980.1,INSD:BP653895.1,INSD:BP819916.1,
INSD:BP837846.1,INSD:ES107013.1,INSD:ES103664.1,
INSD:EL998566.1,INSD:BP818345.1,INSD:BP563021.2,
INSD:ES195441.1,INSD:BP832940.1,INSD:BE528146.1,
INSD:ES092253.1,INSD:BP828307.1,INSD:EG504998.1,
INSD:BP811929.1,INSD:AV807009.1,INSD:ES037267.1,
INSD:BE526260.1,INSD:ES005109.1,INSD:BP791479.1,
INSD:ES005171.1,INSD:ES007299.1,INSD:ES122485.1,
INSD:DR260147.1,INSD:BP839550.1,INSD:BP822798.1,
INSD:ES081042.1,INSD:ES117316.1,INSD:BP585969.1,
INSD:AV814584.1,INSD:BP840116.1,INSD:BP830696.1,
INSD:BP647664.1,INSD:AV786021.1,INSD:AV824406.1,
INSD:ES046462.1,INSD:EG496014.1,INSD:BP643497.1,
INSD:BP819573.1,INSD:ES162535.1,INSD:ES090158.1,
INSD:EG500137.1,INSD:ES096200.1,INSD:ES037853.1,
INSD:BP587713.1,INSD:EL983043.1,INSD:EG496013.1,
INSD:ES042735.1,INSD:ES137854.1,INSD:BP646094.1,
INSD:ES020876.1,INSD:ES156479.1,INSD:BP834281.1,
INSD:BP654530.1"
/note="ARABIDOPSIS THALIANA BETA-AMYLASE (ATBETA-AMY);
FUNCTIONS IN: beta-amylase activity; INVOLVED IN: response
to herbivore, starch catabolic process; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Glycoside hydrolase, family 14, conserved site
(InterPro:IPR018238), Glycoside hydrolase, family 14
(InterPro:IPR001554), Glycoside hydrolase, catalytic core
(InterPro:IPR017853), Glycoside hydrolase, family 14B,
plant (InterPro:IPR001371), Glycoside hydrolase, subgroup,
catalytic core (InterPro:IPR013781); BEST Arabidopsis
thaliana protein match is: beta-amylase 6
(TAIR:AT2G32290.1); Has 815 Blast hits to 813 proteins in
158 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi
- 0; Plants - 661; Viruses - 0; Other Eukaryotes - 65
(source: NCBI BLink)."
/db_xref="TAIR:AT4G15210"
/db_xref="Araport:AT4G15210"
intron_pos 22:0 (1/6)
intron_pos 156:0 (2/6)
intron_pos 211:0 (3/6)
intron_pos 299:0 (4/6)
intron_pos 369:0 (5/6)
intron_pos 410:1 (6/6)
BEGIN
1 MATNYNEKLL LNYVPVYVML PLGVVNVENV FADPETLETQ LKRLKEEAGV DGVMVDVWWG
61 IIESKGPKQY DWTAYKTLFQ LIARLGLKIQ AIMSFHQCGG NVGDIVTIPI PQWVRDVGDN
121 DPDIYYTNRK GTRDIEYLSI GVDNLPLFAG RTAVQLYSDY MSSFKENMAD LIEAGVIVDI
181 EVGLGPAGEL RYPSYPQSQG WVFPGIGEFQ CYDKYLKKDF KEAAAKAGHP EWDLPEDAGE
241 YNDKPEETGF FKKDGTYVSE KGKFFMTWYS NKLIFHGDQI LGEANKIFAG LKVNLAAKVS
301 GIHWLYNHHS HAAELTAGYY NLFKRDGYRP IARMLSKHYG ILNFTCLEMK DTDNTAEALS
361 APQELVQEVL SKAWKEGIEV AGENALETYG AKGYNQILLN ARPNGVNPNG LLWRRSEVRA
//