LOCUS AEE83509.1 684 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002687-2354
PROTEIN_ID AEE83509.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="LOI1"
/locus_tag="AT4G14850"
/gene_synonym="DL3465W"
/gene_synonym="FCAALL.335"
/gene_synonym="lovastatin insensitive 1"
/gene_synonym="MEF11"
/gene_synonym="mitochondrial RNA editing factor 11"
/inference="Similar to RNA sequence,
EST:INSD:AU235868.1,INSD:BP798293.1,INSD:BP659492.1,
INSD:BP819826.1,INSD:BP797779.1,INSD:ES143191.1,
INSD:BP802439.1,INSD:BP660438.1,INSD:BP820448.1,
INSD:BP639008.1,INSD:AU226640.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828278.1,INSD:BT010464.1,INSD:AK227954.1"
/note="lovastatin insensitive 1 (LOI1); CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
Tetratricopeptide repeat (TPR)-like superfamily protein
(TAIR:AT5G09950.1); Has 35457 Blast hits to 13266 proteins
in 222 species: Archae - 0; Bacteria - 4; Metazoa - 55;
Fungi - 21; Plants - 34914; Viruses - 0; Other Eukaryotes
- 463 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14850"
/db_xref="Araport:AT4G14850"
intron_pos 530:2 (1/1)
BEGIN
1 MSLLSADALG LLLKNAISAS SMRLGRVVHA RIVKTLDSPP PPFLANYLIN MYSKLDHPES
61 ARLVLRLTPA RNVVSWTSLI SGLAQNGHFS TALVEFFEMR REGVVPNDFT FPCAFKAVAS
121 LRLPVTGKQI HALAVKCGRI LDVFVGCSAF DMYCKTRLRD DARKLFDEIP ERNLETWNAF
181 ISNSVTDGRP REAIEAFIEF RRIDGHPNSI TFCAFLNACS DWLHLNLGMQ LHGLVLRSGF
241 DTDVSVCNGL IDFYGKCKQI RSSEIIFTEM GTKNAVSWCS LVAAYVQNHE DEKASVLYLR
301 SRKDIVETSD FMISSVLSAC AGMAGLELGR SIHAHAVKAC VERTIFVGSA LVDMYGKCGC
361 IEDSEQAFDE MPEKNLVTRN SLIGGYAHQG QVDMALALFE EMAPRGCGPT PNYMTFVSLL
421 SACSRAGAVE NGMKIFDSMR STYGIEPGAE HYSCIVDMLG RAGMVERAYE FIKKMPIQPT
481 ISVWGALQNA CRMHGKPQLG LLAAENLFKL DPKDSGNHVL LSNTFAAAGR WAEANTVREE
541 LKGVGIKKGA GYSWITVKNQ VHAFQAKDRS HILNKEIQTT LAKLRNEMEA AGYKPDLKLS
601 LYDLEEEEKA AEVSHHSEKL ALAFGLLSLP LSVPIRITKN LRICGDCHSF FKFVSGSVKR
661 EIIVRDNNRF HRFKDGICSC KDYW
//