LOCUS AEE83487.1 315 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TIFY domain/Divergent CCT motif family
protein protein.
ACCESSION CP002687-2319
PROTEIN_ID AEE83487.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14720"
/gene_synonym="DL3400C"
/gene_synonym="FCAALL.297"
/gene_synonym="PEAPOD 2"
/gene_synonym="PPD2"
/gene_synonym="TIFY4B"
/inference="Similar to RNA sequence,
EST:INSD:DR274555.1,INSD:EL246691.1,INSD:BP595110.1,
INSD:ES157164.1,INSD:ES136415.1,INSD:AV442157.1,
INSD:EL206972.1,INSD:AU229918.1,INSD:DR274556.1,
INSD:ES025881.1,INSD:BP799011.1,INSD:EG440329.1,
INSD:ES104920.1,INSD:EG440330.1,INSD:AV799356.1,
INSD:AV441302.2,INSD:AU238698.1,INSD:EH884115.1,
INSD:EL094279.1,INSD:AV820159.1,INSD:EL163694.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827208.1,INSD:BX827557.1,INSD:AK117854.1"
/note="TIFY domain/Divergent CCT motif family protein;
CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399),
Acireductone dioxygenase, ARD (InterPro:IPR004313), CCT
domain-like (InterPro:IPR018467); BEST Arabidopsis
thaliana protein match is: TIFY domain/Divergent CCT motif
family protein (TAIR:AT4G14713.1); Has 315 Blast hits to
312 proteins in 29 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14720"
/db_xref="Araport:AT4G14720"
intron_pos 40:1 (1/8)
intron_pos 87:0 (2/8)
intron_pos 146:2 (3/8)
intron_pos 177:0 (4/8)
intron_pos 209:1 (5/8)
intron_pos 229:1 (6/8)
intron_pos 250:2 (7/8)
intron_pos 314:1 (8/8)
BEGIN
1 MDVGVTTAKS ILEKPLKLLT EEDISQLTRE DCRKFLKEKG MRRPSWNKSQ AIQQVLSLKA
61 LYEPGDDSGA GILRKILVSQ PPNPPRVTTT LIEPRNELEA CGRIPLQEDD GACHRRDSPR
121 SAEFSGSSGQ FVADKDSHKT VSVSPRSPAE TNAVVGQMTI FYSGKVNVYD GVPPEKARSI
181 MHFAANPIDL PENGIFASSR MISKPMSKEK MVELPQYGLE KAPASRDSDV EGQANRKVSL
241 QRYLEKRKDR RFSKTKKAPG VASSSLEMFL NRQPRMNAAY SQNLSGTGHC ESPENQTKSP
301 NISVDLNSDL NSEDN
//