LOCUS AEE83441.1 283 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002687-2249
PROTEIN_ID AEE83441.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="bHLH104"
/locus_tag="AT4G14410"
/gene_synonym="basic Helix-Loop-Helix 104"
/gene_synonym="DL3245W"
/gene_synonym="FCAALL.201"
/inference="Similar to RNA sequence,
EST:INSD:BP615888.1,INSD:DR381549.1,INSD:DR348542.1,
INSD:DR186267.1,INSD:ES116819.1,INSD:DR186263.1,
INSD:BP571451.1,INSD:DR186272.1,INSD:BP781289.1,
INSD:DR186261.1,INSD:EL244016.1,INSD:DR186268.1,
INSD:DR186270.1,INSD:BP561537.1,INSD:ES149258.1,
INSD:EL182768.1,INSD:ES135044.1,INSD:EL333496.1,
INSD:BP798640.1,INSD:EL322508.1,INSD:DR186260.1,
INSD:DR186275.1,INSD:DR376714.1,INSD:DR186265.1,
INSD:DR186277.1,INSD:EL312787.1,INSD:BP803257.1,
INSD:AV793752.1,INSD:DR186278.1,INSD:BP785423.1,
INSD:DR749646.1,INSD:EL303222.1,INSD:AV518993.1,
INSD:EL200299.1,INSD:BP574345.1,INSD:DR186269.1,
INSD:EH859008.1,INSD:EH968839.1,INSD:ES130072.1,
INSD:DR186264.1,INSD:ES151894.1,INSD:EL141615.1,
INSD:ES070695.1,INSD:EL267281.1,INSD:EH863740.1,
INSD:AV565290.1,INSD:DR186262.1,INSD:DR186273.1,
INSD:DR186271.1,INSD:AV790575.1,INSD:DR186281.1,
INSD:EL985478.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY102106.1,INSD:AY133565.1,INSD:AY088053.1"
/note="basic Helix-Loop-Helix 104 (bHLH104); FUNCTIONS IN:
DNA binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT3G23210.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G14410"
/db_xref="Araport:AT4G14410"
intron_pos 19:2 (1/4)
intron_pos 122:2 (2/4)
intron_pos 149:2 (3/4)
intron_pos 204:0 (4/4)
BEGIN
1 MYPSLDDDFV SDLFCFDQSN GAELDDYTQF GVNLQTDQED TFPDFVSYGV NLQQEPDEVF
61 SIGASQLDLS SYNGVLSLEP EQVGQQDCEV VQEEEVEINS GSSGGAVKEE QEHLDDDCSR
121 KRARTGSCSR GGGTKACRER LRREKLNERF MDLSSVLEPG RTPKTDKPAI LDDAIRILNQ
181 LRDEALKLEE TNQKLLEEIK SLKAEKNELR EEKLVLKADK EKTEQQLKSM TAPSSGFIPH
241 IPAAFNHNKM AVYPSYGYMP MWHYMPQSVR DTSRDQELRP PAA
//