LOCUS AEE83422.1 87 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Splicing factor 3B subunit 5/RDS3
complex subunit 10 protein.
ACCESSION CP002687-2215
PROTEIN_ID AEE83422.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14342"
/inference="Similar to RNA sequence,
EST:INSD:BP815333.1,INSD:ES012275.1,INSD:CK118655.1,
INSD:BP665374.1,INSD:EL120427.1,INSD:BP848327.1,
INSD:EH815204.1,INSD:AV790435.1,INSD:AV824494.1,
INSD:DR372847.1,INSD:BP866205.1,INSD:DR320983.1,
INSD:ES209017.1,INSD:BP629492.1,INSD:DR320969.1,
INSD:ES026254.1,INSD:EL326476.1,INSD:DR207304.1,
INSD:BP665513.1,INSD:N37866.1,INSD:DR320980.1,
INSD:ES082092.1,INSD:AV786376.1,INSD:DR320988.1,
INSD:DR354329.1,INSD:DR320985.1,INSD:ES174788.1,
INSD:EH880710.1,INSD:DR320974.1,INSD:EL092633.1,
INSD:ES107936.1,INSD:EL037645.1,INSD:DR320972.1,
INSD:DR320978.1,INSD:DR320971.1,INSD:DR320987.1,
INSD:DR320976.1,INSD:EL216417.1,INSD:DR320970.1,
INSD:DR320968.1,INSD:ES170938.1,INSD:DR320986.1,
INSD:ES168387.1,INSD:DR320977.1,INSD:AV530534.1,
INSD:DR320979.1,INSD:DR320981.1,INSD:EH851362.1,
INSD:ES035823.1,INSD:DR320984.1,INSD:BP646305.1,
INSD:ES133950.1,INSD:EL156645.1,INSD:CB260156.1,
INSD:DR320973.1,INSD:ES133378.1,INSD:EL253536.1,
INSD:DR320975.1,INSD:DR320982.1,INSD:DR320989.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY064021.1,INSD:AK118697.1,INSD:BX828586.1,
INSD:AK220847.1"
/note="Splicing factor 3B subunit 5/RDS3 complex subunit
10; CONTAINS InterPro DOMAIN/s: Splicing factor 3B subunit
5/RDS3 complex subunit 10 (InterPro:IPR009846), Splicing
factor 3B, subunit 5 (InterPro:IPR017089); BEST
Arabidopsis thaliana protein match is: Splicing factor 3B
subunit 5/RDS3 complex subunit 10 (TAIR:AT3G23325.1); Has
333 Blast hits to 333 proteins in 170 species: Archae - 0;
Bacteria - 0; Metazoa - 121; Fungi - 97; Plants - 62;
Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14342"
/db_xref="Araport:AT4G14342"
intron_pos 3:0 (1/3)
intron_pos 31:2 (2/3)
intron_pos 73:0 (3/3)
BEGIN
1 MQASDRFNIN SQLEHLQAKY VGTGHADLSR FEWAVNIQRD SYASYIGHYP MLSYFAIAEN
61 ESIGRERYNF MQKMLLPCGL PPEREEE
//