LOCUS AEE83418.1 105 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Zinc-binding ribosomal protein family
protein protein.
ACCESSION CP002687-2211
PROTEIN_ID AEE83418.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14320"
/gene_synonym="API2"
/gene_synonym="APICULATA 2"
/gene_synonym="FCAALL.124"
/gene_synonym="RPL36a B"
/gene_synonym="RPL36aB"
/inference="Similar to RNA sequence,
EST:INSD:DR321424.1,INSD:DR321446.1,INSD:DR321428.1,
INSD:EL294237.1,INSD:DR321492.1,INSD:ES202625.1,
INSD:EL975776.1,INSD:AA394443.1,INSD:ES128981.1,
INSD:ES168491.1,INSD:DR321392.1,INSD:ES120086.1,
INSD:DR321482.1,INSD:DR321441.1,INSD:DR321476.1,
INSD:EL305161.1,INSD:DR321451.1,INSD:BP661292.1,
INSD:EH816613.1,INSD:ES044844.1,INSD:ES078679.1,
INSD:DR321404.1,INSD:DR321423.1,INSD:ES199197.1,
INSD:ES030668.1,INSD:DR321431.1,INSD:DR321449.1,
INSD:AI994160.1,INSD:EL982537.1,INSD:DR321490.1,
INSD:ES189631.1,INSD:ES116213.1,INSD:DR321479.1,
INSD:N38323.1,INSD:ES132516.1,INSD:DR321433.1,
INSD:EL987059.1,INSD:ES080898.1,INSD:DR321430.1,
INSD:BP837737.1,INSD:DR321418.1,INSD:DR321409.1,
INSD:DR321436.1,INSD:EH872374.1,INSD:BP595924.1,
INSD:DR321435.1,INSD:DR321483.1,INSD:DR321438.1,
INSD:DR321489.1,INSD:ES062339.1,INSD:EH888905.1,
INSD:DR321472.1,INSD:EL048317.1,INSD:EL128958.1,
INSD:ES021691.1,INSD:DR321415.1,INSD:ES178411.1,
INSD:CF651727.1,INSD:CB262556.1,INSD:EL060693.1,
INSD:BP649088.1,INSD:DR321468.1,INSD:DR321411.1,
INSD:EL061867.1,INSD:AA650798.1,INSD:ES132978.1,
INSD:DR321389.1,INSD:DR321475.1,INSD:ES192753.1,
INSD:DR321396.1,INSD:DR321432.1,INSD:ES167936.1,
INSD:DR321467.1,INSD:ES119571.1,INSD:DR321414.1,
INSD:ES044710.1,INSD:DR321474.1,INSD:ES095850.1,
INSD:EL136311.1,INSD:BP818533.1,INSD:DR321495.1,
INSD:EL998131.1,INSD:ES063913.1,INSD:ES024478.1,
INSD:DR321434.1,INSD:EL172224.1,INSD:ES172598.1,
INSD:EL995189.1,INSD:ES177508.1,INSD:ES178382.1,
INSD:ES021905.1,INSD:DR321457.1,INSD:ES178454.1,
INSD:DR321408.1,INSD:CB261982.1,INSD:DR321400.1,
INSD:DR321494.1,INSD:ES004015.1,INSD:EL051887.1,
INSD:BP567776.1,INSD:CB261990.1,INSD:ES036278.1,
INSD:AA720114.1,INSD:DR321445.1,INSD:DR321405.1,
INSD:DR321399.1,INSD:DR321488.1,INSD:DR321421.1,
INSD:ES199801.1,INSD:DR321422.1,INSD:DR321452.1,
INSD:DR321458.1,INSD:DR321499.1,INSD:BE528949.1,
INSD:DR321491.1,INSD:ES130632.1,INSD:DR321464.1,
INSD:DR321461.1,INSD:ES165765.1,INSD:EL998740.1,
INSD:EL111277.1,INSD:DR321478.1,INSD:EL986518.1,
INSD:ES108100.1,INSD:ES189621.1,INSD:ES092577.1,
INSD:DR321417.1,INSD:ES212934.1,INSD:EL267481.1,
INSD:ES095446.1,INSD:DR321454.1,INSD:ES190189.1,
INSD:ES073083.1,INSD:EH820623.1,INSD:EL295719.1,
INSD:EL985606.1,INSD:AV785023.1,INSD:DR321393.1,
INSD:BP828718.1,INSD:DR321443.1,INSD:ES198571.1,
INSD:ES210395.1,INSD:DR321497.1,INSD:EH844291.1,
INSD:ES154609.1,INSD:DR321473.1,INSD:EL183630.1,
INSD:DR321426.1,INSD:ES166360.1,INSD:ES167057.1,
INSD:ES062789.1,INSD:ES119514.1,INSD:ES200934.1,
INSD:DR321444.1,INSD:DR321485.1,INSD:DR321487.1,
INSD:DR321480.1,INSD:ES042597.1,INSD:DR321463.1,
INSD:EL322374.1,INSD:DR321412.1,INSD:DR321419.1,
INSD:DR321425.1,INSD:DR321462.1,INSD:DR321469.1,
INSD:DR321416.1,INSD:ES010401.1,INSD:CF773302.1,
INSD:BP592629.1,INSD:DR321410.1,INSD:DR321471.1,
INSD:CB185929.1,INSD:EL991257.1,INSD:EL020948.1,
INSD:BP640972.1,INSD:ES152528.1,INSD:DR321486.1,
INSD:ES113991.1,INSD:DR321460.1,INSD:DR321429.1,
INSD:EL211813.1,INSD:DR321477.1,INSD:EH925906.1,
INSD:ES187346.1,INSD:AV823934.1,INSD:CB074608.1,
INSD:DR321448.1,INSD:EL067399.1,INSD:BP837493.1,
INSD:ES123748.1,INSD:ES160683.1,INSD:ES089890.1,
INSD:DR321437.1,INSD:DR321450.1,INSD:ES084345.1,
INSD:ES024219.1,INSD:EL165355.1,INSD:EL143539.1,
INSD:DR321427.1,INSD:BP659944.1,INSD:ES053950.1,
INSD:BP820783.1,INSD:DR321403.1,INSD:ES004093.1,
INSD:DR321453.1,INSD:ES172558.1,INSD:DR321395.1,
INSD:DR321470.1,INSD:ES016138.1,INSD:AA713144.1,
INSD:DR321498.1,INSD:DR321391.1,INSD:EH812185.1,
INSD:EH911745.1,INSD:DR321496.1,INSD:DR321481.1,
INSD:EL175684.1,INSD:BP829514.1,INSD:DR321439.1,
INSD:DR321455.1,INSD:DR321401.1,INSD:DR321442.1,
INSD:DR321466.1,INSD:EH879271.1,INSD:DR321397.1,
INSD:DR321493.1,INSD:DR321390.1,INSD:DR321447.1,
INSD:CB263817.1,INSD:BP637264.1,INSD:ES108505.1,
INSD:EL982923.1,INSD:DR321413.1,INSD:DR321456.1,
INSD:DR321406.1,INSD:DR321394.1,INSD:ES166527.1,
INSD:ES212781.1,INSD:DR321440.1,INSD:DR321420.1,
INSD:DR321402.1,INSD:EL306631.1,INSD:ES150242.1,
INSD:ES182095.1,INSD:EL170217.1,INSD:DR321407.1,
INSD:DR321398.1,INSD:EL992219.1,INSD:DR321459.1,
INSD:DR321465.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY065121.1,INSD:BX829272.1,INSD:AY085784.1"
/note="Zinc-binding ribosomal protein family protein;
FUNCTIONS IN: structural constituent of ribosome; INVOLVED
IN: translation; LOCATED IN: ribosome, cytosolic large
ribosomal subunit; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Ribosomal protein L44e (InterPro:IPR000552),
Ribosomal protein, zinc-binding domain
(InterPro:IPR011332); BEST Arabidopsis thaliana protein
match is: Zinc-binding ribosomal protein family protein
(TAIR:AT3G23390.1); Has 1023 Blast hits to 1019 proteins
in 360 species: Archae - 169; Bacteria - 1; Metazoa - 377;
Fungi - 167; Plants - 132; Viruses - 0; Other Eukaryotes -
177 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14320"
/db_xref="Araport:AT4G14320"
intron_pos 2:0 (1/3)
intron_pos 62:0 (2/3)
intron_pos 87:0 (3/3)
BEGIN
1 MVNIPKTKNT YCKNKECKKH TLHKVTQYKK GKDSLAAQGK RRYDRKQSGY GGQTKPVFHK
61 KAKTTKKIVL RLQCQSCKHF SQRPIKRCKH FEIGGDKKGK GTSLF
//