LOCUS AEE83411.1 411 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
family protein protein.
ACCESSION CP002687-2203
PROTEIN_ID AEE83411.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14300"
/gene_synonym="DL3190W"
/gene_synonym="FCAALL.156"
/inference="Similar to RNA sequence,
EST:INSD:EL037871.1,INSD:EH938431.1,INSD:BP595734.1,
INSD:EL121627.1,INSD:EL021334.1,INSD:EH914683.1,
INSD:EL230909.1,INSD:EH954227.1,INSD:EH937722.1,
INSD:AV783843.1,INSD:EL013702.1,INSD:AV549406.1,
INSD:EL209009.1,INSD:EH877109.1,INSD:BP821747.1,
INSD:EL970448.1,INSD:EH946544.1,INSD:AV822963.1,
INSD:ES155597.1,INSD:EG499858.1,INSD:BP830554.1,
INSD:EL315868.1,INSD:ES185111.1,INSD:ES206143.1,
INSD:EH945322.1,INSD:EG499859.1,INSD:ES135686.1,
INSD:EG485478.1,INSD:EG485479.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK226323.1,INSD:AJ303457.1"
/note="RNA-binding (RRM/RBD/RNP motifs) family protein;
FUNCTIONS IN: RNA binding, nucleotide binding, nucleic
acid binding; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: RNA-binding (RRM/RBD/RNP motifs) family protein
(TAIR:AT2G33410.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14300"
/db_xref="Araport:AT4G14300"
intron_pos 75:0 (1/1)
BEGIN
1 MDSDQGKLFV GGISWETDED KLREHFTNYG EVSQAIVMRD KLTGRPRGFG FVIFSDPSVL
61 DRVLQEKHSI DTREVDVKRA MSREEQQVSG RTGNLNTSRS SGGDAYNKTK KIFVGGLPPT
121 LTDEEFRQYF EVYGPVTDVA IMYDQATNRP RGFGFVSFDS EDAVDSVLHK TFHDLSGKQV
181 EVKRALPKDA NPGGGGRSMG GGGSGGYQGY GGNESSYDGR MDSNRFLQHQ SVGNGLPSYG
241 SSGYGAGYGN GSNGAGYGAY GGYTGSAGGY GAGATAGYGA TNIPGAGYGS STGVAPRNSW
301 DTPASSGYGN PGYGSGAAHS GYGVPGAAPP TQSPSGYSNQ GYGYGGYSGS DSGYGNQAAY
361 GVVGGRPSGG GSNNPGSGGY MGGGYGDGSW RSDPSQGYGG GYNDGQGRQG Q
//