LOCUS AEE83395.1 371 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING-H2 group F1A protein.
ACCESSION CP002687-2182
PROTEIN_ID AEE83395.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RHF1A"
/locus_tag="AT4G14220"
/gene_synonym="DL3150W"
/gene_synonym="FCAALL.146"
/gene_synonym="RING-H2 group F1A"
/inference="Similar to RNA sequence,
EST:INSD:EL199028.1,INSD:EL124650.1,INSD:BP801939.1,
INSD:DR383290.1,INSD:BP841013.1,INSD:BP821503.1,
INSD:AV812167.1,INSD:EL325711.1,INSD:BP658112.1,
INSD:AU238809.1,INSD:ES031144.1,INSD:H36357.1,
INSD:EL001319.1,INSD:EL981204.1,INSD:DR355402.1,
INSD:AV813590.1,INSD:EL227326.1,INSD:AV542400.1,
INSD:EL264066.1,INSD:AV538281.1,INSD:AI997959.1,
INSD:EG472585.1,INSD:AU230049.1,INSD:AV546907.1,
INSD:EG464129.1,INSD:EG472584.1,INSD:EG420358.1,
INSD:EH918445.1,INSD:EL120097.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ059122.1,INSD:BX828486.1,INSD:BX826308.1,
INSD:AK117968.1,INSD:BX828325.1,INSD:BX827699.1,
INSD:BX827947.1,INSD:BX827754.1,INSD:AF079181.1"
/note="RING-H2 group F1A (RHF1A); FUNCTIONS IN:
ubiquitin-protein ligase activity, zinc ion binding;
INVOLVED IN: regulation of cell cycle, proteasomal protein
catabolic process, megagametogenesis, microgametogenesis;
LOCATED IN: membrane; EXPRESSED IN: 27 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841),
Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST
Arabidopsis thaliana protein match is: RING-H2 group F2A
(TAIR:AT5G22000.3); Has 5179 Blast hits to 4938 proteins
in 253 species: Archae - 0; Bacteria - 16; Metazoa - 1752;
Fungi - 320; Plants - 2058; Viruses - 9; Other Eukaryotes
- 1024 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14220"
/db_xref="Araport:AT4G14220"
intron_pos 61:0 (1/7)
intron_pos 76:2 (2/7)
intron_pos 97:2 (3/7)
intron_pos 135:0 (4/7)
intron_pos 231:2 (5/7)
intron_pos 267:2 (6/7)
intron_pos 367:0 (7/7)
BEGIN
1 MSNFTYTSAF NLSDNSPFNP AIGSSSSSSS ALVVASDDDN NTDDACSICL EPFTLQDPST
61 VTSCKHEYHL QCIIEWSQRS KECPICWQLF VLRDPASQEL LAAVEKERLL KTRNISSSSP
121 ISIHHSHDDF HSEEEESQFS SFDEQFLRHL TEAAHRRCLL RRRDGQISSS LVSSSDPTTI
181 HPTDLVNLYR LSAISHVEHQ NSNPCPSPGS MTPSPVSGHS SIPADSNNGS RISPGPSPSR
241 SSQSPKSPEA SSLPEAIKSK LAAASAKYKE SISKSKQGLK EKLLARNNSV KELSKGVQRE
301 MNAGIAGVAR MIERMDFSSK RFGGSAHVST STATASGFNF SFKGKRVEAN SKSNNNGDKT
361 EPQKLQGGET C
//