LOCUS AEE83392.1 784 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002687-2178
PROTEIN_ID AEE83392.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14200"
/gene_synonym="DL3140C"
/gene_synonym="FCAALL.116"
/inference="Similar to RNA sequence,
EST:INSD:BP841323.1,INSD:ES189648.1,INSD:ES105398.1,
INSD:BP837619.1,INSD:DR365163.1,INSD:EL978627.1,
INSD:EL321140.1,INSD:BX836617.1,INSD:DR365162.1,
INSD:AV825828.1,INSD:AV792537.1,INSD:BP647521.1,
INSD:DR383733.1,INSD:EG453293.1,INSD:ES131707.1,
INSD:BX840972.1,INSD:ES027523.1,INSD:ES150075.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842359.1,INSD:BT002572.1,INSD:AY062513.1,
INSD:AK175764.1,INSD:AK175691.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G14200"
/db_xref="Araport:AT4G14200"
intron_pos 12:1 (1/4)
intron_pos 79:1 (2/4)
intron_pos 138:1 (3/4)
intron_pos 664:1 (4/4)
BEGIN
1 MDSQDHCSNS PGGGKNHVCT KCGWSYSNPH PSAKNRRAHK KICGTIKGFE IFDSEMKKEN
61 LDLPEEHSLD DEQKPPTPSP TVVEKSAPTV VEKAANERIG DVSEEDVFTD AVCEFSRSDS
121 FKEETATNFP AKGTENPGET QQCNNSSTAC EMKSSEVVQD SCEVPPVEVE SASENRQGAQ
181 HSTEGHSMSS ETVIESSQEA QVIDGGDTIS NDRLETECKG KLTKESQSKL ASALGKREDT
241 SDSSWNDEVI YSDVEGPYGF SSEATSMTHP DEASCIVSED VPVHTSPVKA DATQVISASK
301 SVPDDMPFVE NADVYLHGIK GFEEFEVSHS VNPFLPETSK GEECEIDTLT EAENLGIKPE
361 GLSIGSEVSS SDKLLAGDKT EPQGQTDLVA VKEFPSAENI LISKINSEDI GMKAEEGKSS
421 LGNAQTVESE TLRVSLPAVD SVVVDSNADM SSAANKTGLV DLAGNESELM QANVVAEKGN
481 KPKDTLSSES SCYASPVSVV FEGSDASDQI KSSTETSKDS ALQISAESKD EVCRESNNGR
541 LVEESSFINE PNKTEYPISH FGSTGTAPDT VNTANQTSLE IGRTEFNRVV GGLGVIQANE
601 VDGNVKAHNN YAEVPVTIES NDHRDFGRLQ NLSEAHIRSL VSSPLVTRNN TSNASESNLG
661 PVSGLSAGVN KQEDASQNQE ITLEKTTSWG TAKEQHVPLK NLLSEARSPR LQQQAKDHES
721 NNIPRVSSIL GQETSPEDGH WPEKREVSEE WNSPAKYPVD LKREEKKVKG RPFWVPFVCC
781 SNVK
//