LOCUS AEE83390.2 1330 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana putative recombination initiation
defect 1 protein.
ACCESSION CP002687-2175
PROTEIN_ID AEE83390.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PRD1"
/locus_tag="AT4G14180"
/gene_synonym="AtPRD1"
/gene_synonym="DL3130W"
/gene_synonym="FCAALL.114"
/gene_synonym="putative recombination initiation defect 1"
/inference="Similar to RNA sequence,
EST:INSD:EG452926.1,INSD:EH853398.1,INSD:EG481308.1"
/note="putative recombination initiation defect 1 (PRD1);
FUNCTIONS IN: protein binding, protein homodimerization
activity; INVOLVED IN: chiasma assembly, meiotic DNA
double-strand break formation; LOCATED IN: chloroplast;
EXPRESSED IN: floral bud; Has 86 Blast hits to 84 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 21;
Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink)."
/db_xref="TAIR:AT4G14180"
/db_xref="Araport:AT4G14180"
intron_pos 158:0 (1/8)
intron_pos 194:2 (2/8)
intron_pos 253:1 (3/8)
intron_pos 358:1 (4/8)
intron_pos 680:2 (5/8)
intron_pos 919:0 (6/8)
intron_pos 1012:2 (7/8)
intron_pos 1235:0 (8/8)
BEGIN
1 MFFQHSQLQN SDHLLHESMA DSNHQSLSPP CANGHRSTIS LRDDQGGTFC LICFSNLVSD
61 PRIPTVHVSY ALHQLSIAIS EPIFLRTLLS SHIHFLVSPL VHALSSIDDA PIAIQIMDMI
121 SLLCSVEESS IGEDFVERIS DQLSSGALGW SRRQLHMLHC FGVLMSCENI NINSHIRDKE
181 ALVCQLVEGL QLPSEEIRGE ILFALYKFSA LQFTEQNVDG IEVLSLLCPK LLCLSLEALA
241 KTQRDDVRLN CVALLTILAQ QGLLANSHSN SASSMSLDEV DDDPMQTAEN VAARPCLNVL
301 FAEAIKGPLL STDSEVQIKT LDLIFHYISQ ESTPSKQIQV MVEENVADYI FEILRLSECK
361 DQVVNSCLRV LDLFSLAEHS FRKRLVIGFP SVIRVLHYVG EVPCHPFQIQ TLKLISSCIS
421 DFPGIASSSQ VQEIALVLKK MLERYYSQEM GLFPDAFAII CSVFVSLMKT PSFGETADVL
481 TSLQESLRHS ILASLSLPEK DSTQILHAVY LLNEVYVYCT ASTSINKTIC IELRHCVIDV
541 CTSHLLPWFL SDVNEVNEEA TLGIMETFHS ILLQNSDIQA KEFAELLVSA DWFSFSFGCL
601 GNFCTDNMKQ RIYLMLSSLV DILLEQKTGS HIRDALHCLP SDPQDLLFLL GQASSNNQEL
661 ASCQSAALLI FHTSSIYNDR LADDKLVLAS LEQYIILNKT SLICAISDSP ALLNLVNLYG
721 LCRSLQNERY QISYSLEAER IIFHLLNEYE WDLGSINIHL ESLKWLFQQE SISKSLIYQI
781 QKISRNNLIG NEVHNVYGDG RQRSLTYWFA KLISEGDNYA ATLLVNLLTQ LAEKEEQEND
841 VISILNLMNT IVSIFPTASN NLSMNGIGSV IHRLVSGFSN SSLGTSFRTL LLLVFNILTS
901 VQPAVLMIDE SWYAVSIKLL NFLSLRDTAI KQNHEDMVVI GILSLVLYHS SDGALVEASR
961 NIVSNSYLVS AINTVVDVAC SKGPALTQCQ DETNIGEALA FTLLLYFFSL RSLQIVLAGA
1021 VDWQTFFGTS TSLETLPVVC IHCHNLCRLM HFGAPQIKLI ASYCLLELLT GLSEQVDIKK
1081 EQLQCSSSYL KSMKAVLGGL VFCDDIRVAT NSALCLSMIL GWEDMEGRTE MLKTSSWYRF
1141 IAEEMSVSLA MPCSASSTYV NHHKPAVYLT VAMLRLKNKP VWLRTVFDES CISSMIQNLN
1201 GINISREIVI LFRELMQAEL LNSQQVTKLD RAFQECRKQM HRNGTRDETV EEQVQRKIPS
1261 IHDHSEFCNY LVHLMVSNSF GHPSESETYT QKKKQILDEM EQFSELISTR EGRVSPIQEE
1321 TRQMQTERIV
//