LOCUS AEE83387.1 772 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Sec23/Sec24 protein transport family
protein protein.
ACCESSION CP002687-2170
PROTEIN_ID AEE83387.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14160"
/gene_synonym="DL3120W"
/gene_synonym="FCAALL.112"
/inference="Similar to RNA sequence,
EST:INSD:AV782931.1,INSD:BP565649.1,INSD:EL280894.1,
INSD:BP782219.1,INSD:BP795665.1,INSD:AV558271.1,
INSD:AV812850.1,INSD:AV562872.1,INSD:AV800964.1,
INSD:BP578485.1,INSD:AV528789.1,INSD:T76694.1,
INSD:BE520279.1,INSD:BP578039.1,INSD:AI100047.1,
INSD:EH824361.1,INSD:BP582850.1,INSD:BP601781.1,
INSD:BP638681.1,INSD:EH984292.1,INSD:BP621604.1,
INSD:EL287370.1,INSD:AV831410.1,INSD:AV528777.1,
INSD:ES019884.1,INSD:AV524206.1,INSD:AV529505.1,
INSD:EH858411.1,INSD:EL213088.1,INSD:BP794847.1,
INSD:BP828827.1,INSD:BP827955.1,INSD:AV553892.1,
INSD:ES156280.1,INSD:BP780266.1,INSD:BP799456.1,
INSD:ES041125.1,INSD:AV797388.1,INSD:AV530062.1,
INSD:BX837374.1,INSD:DR363558.1,INSD:AV529452.1,
INSD:AV523169.1,INSD:AV556945.1,INSD:EL178576.1,
INSD:BP780403.1,INSD:AI993420.1,INSD:DR383693.1,
INSD:AV795434.1,INSD:EG478400.1,INSD:BP805236.1,
INSD:AV828287.1,INSD:BP833920.1,INSD:BE520278.1,
INSD:ES136692.1,INSD:AV523162.1,INSD:BP838019.1,
INSD:AV794361.1,INSD:BP800747.1,INSD:BP792943.1,
INSD:ES039485.1,INSD:BP838765.1,INSD:N96737.1,
INSD:BP609647.1,INSD:T76712.1,INSD:AV528320.1,
INSD:BX837459.1,INSD:BP645591.1,INSD:BP617719.1,
INSD:AV566087.1,INSD:EH969107.1,INSD:EG478399.1,
INSD:EH950850.1,INSD:BP649439.1,INSD:EL319154.1,
INSD:BP829152.1,INSD:AI100039.1,INSD:ES190844.1,
INSD:EL140728.1,INSD:AV815993.1,INSD:BP613427.1,
INSD:BP802136.1,INSD:AV822230.1,INSD:EH882585.1,
INSD:BP620367.1,INSD:EL129992.1,INSD:ES167297.1,
INSD:EL071037.1,INSD:EH899127.1,INSD:BP816329.1,
INSD:BP575599.1,INSD:BP807843.1,INSD:ES017533.1,
INSD:BP834360.1,INSD:ES135392.1,INSD:AV567551.1,
INSD:BE529851.1,INSD:AV797927.1,INSD:BE529387.1,
INSD:ES129911.1,INSD:BP832995.1,INSD:EL089462.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX841541.1,INSD:AY074391.1,INSD:AY122928.1,
INSD:AY093776.1"
/note="Sec23/Sec24 protein transport family protein;
FUNCTIONS IN: transporter activity, zinc ion binding;
INVOLVED IN: intracellular protein transport, transport,
ER to Golgi vesicle-mediated transport; LOCATED IN: COPII
vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Sec23/Sec24, helical domain (InterPro:IPR006900),
Sec23/Sec24 beta-sandwich (InterPro:IPR012990),
Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc
finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin
domain (InterPro:IPR007123); BEST Arabidopsis thaliana
protein match is: Sec23/Sec24 protein transport family
protein (TAIR:AT3G23660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G14160"
/db_xref="Araport:AT4G14160"
intron_pos 253:0 (1/11)
intron_pos 311:0 (2/11)
intron_pos 365:0 (3/11)
intron_pos 412:2 (4/11)
intron_pos 438:0 (5/11)
intron_pos 494:2 (6/11)
intron_pos 522:0 (7/11)
intron_pos 548:0 (8/11)
intron_pos 602:0 (9/11)
intron_pos 690:0 (10/11)
intron_pos 725:0 (11/11)
BEGIN
1 MAEMADKAKV EEMDWEGIDG VRMTWNLWPR TKVEASKCVI PLAASISPIR RHPLILDLPY
61 APLDCKTCKA LLNAFARVDF AAMNWVCPFC YHRNHFPSHY HSISEINLPG ELYPQYTTVE
121 YTLPPDPSRV PPPPVFVFVL DTCMIEEELG YAKSALKQAI GLLPENALVG FVSFGTQAHV
181 HELGFSEMSK VFVFKGNKEV TKDQILDQLG LGSSSRRAPT SGFSKGAQNG FQSSGVDRFL
241 LPASECEYTL DLLLDELQSD QWPVQPGHRP QRCTGVALSV AAGLLGACLP GTGARIVALV
301 GGPCTEGPGT IISKDLSDPV RSHKDLDKDA APYYKKAVKF YDSIAKQLVA QGHVLDLFAS
361 ALDQVGVAEM KVAVESTGGL VVLSESFGHS VFKDSFKRMF EDGEHSLGLC FNGTLEINCS
421 KDIKIQGVIG PCSSLEKKGP NVADTVIGEG NTSAWKLCGL DKSTCLTVFF DLSSTGSTAP
481 GALNQQLYLQ FITRYQNSEG KSLARVTTLT RQWVDTAVST ENLVQGFDQE TAAVVMARLT
541 SLKMETEEGF DATRWLDRTL IRLCSKFGEY RKDDPTSFTL KPYLTLFPQF MFNLRRSQFV
601 QVFNNSPDET AYFRMLLNRE NISNAIVMIQ PSLTSYSFNS GPQAALLDVA SIAADKILLL
661 DAYFSVVVFH GMTISQWRNM GYHHQPEHEA FAQLLQAPQE DSQMLVRERF PVPRLVVCDQ
721 HGSQARFLLA KLNPSATYNN ANEMSAGSDI IFTDDVSLQV FIEHLQKLAV QS
//