LOCUS AEE83386.1 620 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Sec23/Sec24 protein transport family
protein protein.
ACCESSION CP002687-2171
PROTEIN_ID AEE83386.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G14160"
/gene_synonym="DL3120W"
/gene_synonym="FCAALL.112"
/inference="Similar to RNA sequence,
EST:INSD:AV782931.1,INSD:BP565649.1,INSD:EL280894.1,
INSD:BP782219.1,INSD:BP795665.1,INSD:AV558271.1,
INSD:AV812850.1,INSD:AV562872.1,INSD:AV800964.1,
INSD:BP578485.1,INSD:AV528789.1,INSD:BP578039.1,
INSD:AI100047.1,INSD:BE520279.1,INSD:EH824361.1,
INSD:BP582850.1,INSD:BP601781.1,INSD:BP638681.1,
INSD:EH984292.1,INSD:BP621604.1,INSD:EL287370.1,
INSD:AV831410.1,INSD:AV528777.1,INSD:ES019884.1,
INSD:AV524206.1,INSD:AV529505.1,INSD:EH858411.1,
INSD:EL213088.1,INSD:BP794847.1,INSD:BP828827.1,
INSD:BP827955.1,INSD:AV553892.1,INSD:ES156280.1,
INSD:BP780266.1,INSD:BP799456.1,INSD:ES041125.1,
INSD:AV797388.1,INSD:AV530062.1,INSD:BX837374.1,
INSD:DR363558.1,INSD:AV529452.1,INSD:AV523169.1,
INSD:AV556945.1,INSD:EL178576.1,INSD:BP780403.1,
INSD:AI993420.1,INSD:DR383693.1,INSD:AV795434.1,
INSD:EG478400.1,INSD:BP805236.1,INSD:AV828287.1,
INSD:BP833920.1,INSD:BE520278.1,INSD:ES136692.1,
INSD:AV523162.1,INSD:BP838019.1,INSD:AV794361.1,
INSD:BP800747.1,INSD:BP792943.1,INSD:ES039485.1,
INSD:BP838765.1,INSD:N96737.1,INSD:BP609647.1,
INSD:T76712.1,INSD:AV528320.1,INSD:BX837459.1,
INSD:BP645591.1,INSD:BP617719.1,INSD:AV566087.1,
INSD:EH969107.1,INSD:EG478399.1,INSD:EH950850.1,
INSD:BP649439.1,INSD:EL319154.1,INSD:BP829152.1,
INSD:T88467.1,INSD:AI100039.1,INSD:ES190844.1,
INSD:EL140728.1,INSD:AV815993.1,INSD:BP613427.1,
INSD:BP802136.1,INSD:AV822230.1,INSD:EH882585.1,
INSD:BP620367.1,INSD:EL071037.1,INSD:ES167297.1,
INSD:EH899127.1,INSD:BP816329.1,INSD:BP575599.1,
INSD:BP807843.1,INSD:ES017533.1,INSD:BP834360.1,
INSD:ES135392.1,INSD:AV567551.1,INSD:BE529851.1,
INSD:AV797927.1,INSD:BE529387.1,INSD:ES129911.1,
INSD:BP832995.1,INSD:EL089462.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX841541.1"
/note="Sec23/Sec24 protein transport family protein;
FUNCTIONS IN: transporter activity, zinc ion binding;
INVOLVED IN: intracellular protein transport, transport,
ER to Golgi vesicle-mediated transport; LOCATED IN: COPII
vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Sec23/Sec24, helical domain (InterPro:IPR006900),
Sec23/Sec24 beta-sandwich (InterPro:IPR012990),
Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc
finger, Sec23/Sec24-type (InterPro:IPR006895); BEST
Arabidopsis thaliana protein match is: Sec23/Sec24 protein
transport family protein (TAIR:AT3G23660.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G14160"
/db_xref="Araport:AT4G14160"
intron_pos 253:0 (1/9)
intron_pos 311:0 (2/9)
intron_pos 365:0 (3/9)
intron_pos 412:2 (4/9)
intron_pos 438:0 (5/9)
intron_pos 494:2 (6/9)
intron_pos 522:0 (7/9)
intron_pos 548:0 (8/9)
intron_pos 602:0 (9/9)
BEGIN
1 MAEMADKAKV EEMDWEGIDG VRMTWNLWPR TKVEASKCVI PLAASISPIR RHPLILDLPY
61 APLDCKTCKA LLNAFARVDF AAMNWVCPFC YHRNHFPSHY HSISEINLPG ELYPQYTTVE
121 YTLPPDPSRV PPPPVFVFVL DTCMIEEELG YAKSALKQAI GLLPENALVG FVSFGTQAHV
181 HELGFSEMSK VFVFKGNKEV TKDQILDQLG LGSSSRRAPT SGFSKGAQNG FQSSGVDRFL
241 LPASECEYTL DLLLDELQSD QWPVQPGHRP QRCTGVALSV AAGLLGACLP GTGARIVALV
301 GGPCTEGPGT IISKDLSDPV RSHKDLDKDA APYYKKAVKF YDSIAKQLVA QGHVLDLFAS
361 ALDQVGVAEM KVAVESTGGL VVLSESFGHS VFKDSFKRMF EDGEHSLGLC FNGTLEINCS
421 KDIKIQGVIG PCSSLEKKGP NVADTVIGEG NTSAWKLCGL DKSTCLTVFF DLSSTGSTAP
481 GALNQQLYLQ FITRYQNSEG KSLARVTTLT RQWVDTAVST ENLVQGFDQE TAAVVMARLT
541 SLKMETEEGF DATRWLDRTL IRLCSKFGEY RKDDPTSFTL KPYLTLFPQF MFNLRRSQFV
601 QDLRQLCWMW LPLQLTRFFY
//