LOCUS AEE83342.1 470 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein protein.
ACCESSION CP002687-2115
PROTEIN_ID AEE83342.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EDA36"
/locus_tag="AT4G13890"
/gene_synonym="EDA37"
/gene_synonym="EMBRYO SAC DEVELOPMENT ARREST 36"
/gene_synonym="EMBRYO SAC DEVELOPMENT ARREST 37"
/gene_synonym="F18A5.280"
/gene_synonym="F18A5_280"
/gene_synonym="SERINE HYDROXYMETHYLTRANSFERASE 5"
/gene_synonym="SHM5"
/inference="Similar to RNA sequence,
EST:INSD:EG526185.1,INSD:AI099635.1,INSD:T88270.1"
/note="EMBRYO SAC DEVELOPMENT ARREST 37 (EDA36); FUNCTIONS
IN: pyridoxal phosphate binding, glycine
hydroxymethyltransferase activity, catalytic activity;
INVOLVED IN: glycine metabolic process, polar nucleus
fusion, L-serine metabolic process, pollen development;
LOCATED IN: cellular_component unknown; EXPRESSED IN: male
gametophyte, pollen tube; EXPRESSED DURING: L mature
pollen stage, M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: Pyridoxal phosphate-dependent transferase, major
domain (InterPro:IPR015424), Serine
hydroxymethyltransferase, pyridoxal phosphate binding site
(InterPro:IPR019798), Pyridoxal phosphate-dependent
transferase, major region, subdomain 1
(InterPro:IPR015421), Serine hydroxymethyltransferase
(InterPro:IPR001085); BEST Arabidopsis thaliana protein
match is: serine hydroxymethyltransferase 4
(TAIR:AT4G13930.1); Has 11625 Blast hits to 11598 proteins
in 2846 species: Archae - 258; Bacteria - 6397; Metazoa -
338; Fungi - 287; Plants - 371; Viruses - 6; Other
Eukaryotes - 3968 (source: NCBI BLink)."
/db_xref="TAIR:AT4G13890"
/db_xref="Araport:AT4G13890"
intron_pos 357:1 (1/2)
intron_pos 391:1 (2/2)
BEGIN
1 MEPVYSWGNT HLDFVDPEIY DLIEKEKHRQ CRGIELIAAE NFTSVAVMEA LGSCLTNKYS
61 EGMPGNRYYG GTEFIDEIES LCRSRSLEAF HCNPEKWGVN VQPYSGSPAN FAAYTALLQP
121 HDRIMGLDLP SGGHITHGYY SSGGKNISAT SIYFENLPYK VDSKTGYIDY DKLEEKAMDF
181 RPKLIICGGT SYPREWDYAR FRAVADKVGA FLLCDMAHNS ALVAAQEAAD PFEYCDVVTT
241 STHKSLRGPR AGMIFYRKGP KPAKKGQPEG EVYDFDAKIN SAVFPALQSG PHNNKIGALA
301 VALKQVMAPS FKVYAKQVKA NAACLASYLI NKGYTLVTDG TDNHLILWDL RPLGLTGNKV
361 EKVCELCYIT LNRNAVFGDT SFLAPGGVRI GTPAMTSRGL VEKDFEKIGE FLHRAVTITL
421 DIQEQYGKVM KDFNKGLVNN KEIDEIKADV EEFTYDFDMP GFFISESRND
//