LOCUS AEE83334.1 153 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana glycine-rich RNA-binding protein 2 protein.
ACCESSION CP002687-2107
PROTEIN_ID AEE83334.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="GR-RBP2"
/locus_tag="AT4G13850"
/gene_synonym="ATGRP2"
/gene_synonym="F18A5.240"
/gene_synonym="F18A5_240"
/gene_synonym="glycine rich protein 2"
/gene_synonym="GLYCINE-RICH RNA-BINDING PROTEIN"
/gene_synonym="glycine-rich RNA-binding protein 2"
/gene_synonym="GLYCINE-RICH RNA-BINDING PROTEIN 2"
/gene_synonym="GRP2"
/inference="Similar to RNA sequence,
EST:INSD:DR317926.1,INSD:DR324351.1,INSD:ES071645.1,
INSD:Z26410.1,INSD:BP812570.1,INSD:ES108147.1,
INSD:DR350352.1,INSD:ES100452.1,INSD:ES078760.1,
INSD:ES144063.1,INSD:DR324358.1,INSD:DR324325.1,
INSD:DR317925.1,INSD:ES010804.1,INSD:EL232561.1,
INSD:DR324291.1,INSD:DR324277.1,INSD:DR324308.1,
INSD:DR324272.1,INSD:BP844257.1,INSD:DR350360.1,
INSD:DR350356.1,INSD:ES188292.1,INSD:BP866817.1,
INSD:EL976361.1,INSD:ES054548.1,INSD:ES147741.1,
INSD:BP843245.1,INSD:EG449076.1,INSD:ES141287.1,
INSD:DR225013.1,INSD:DR324314.1,INSD:DR350364.1,
INSD:DR230231.1,INSD:DR324293.1,INSD:ES167170.1,
INSD:DR324285.1,INSD:EG498026.1,INSD:T22144.1,
INSD:DR324344.1,INSD:ES108741.1,INSD:DR324278.1,
INSD:EL970856.1,INSD:ES106969.1,INSD:DR350350.1,
INSD:DR350359.1,INSD:AI100629.1,INSD:EL032846.1,
INSD:EG428614.1,INSD:BP822242.1,INSD:DR324286.1,
INSD:DR324356.1,INSD:EH850326.1,INSD:DR324261.1,
INSD:ES182375.1,INSD:EL986698.1,INSD:DR376976.1,
INSD:DR324290.1,INSD:DR317920.1,INSD:EG517392.1,
INSD:DR350363.1,INSD:DR324274.1,INSD:EL082357.1,
INSD:BP828882.1,INSD:EL250150.1,INSD:EL999426.1,
INSD:ES135253.1,INSD:DR324318.1,INSD:ES121944.1,
INSD:ES083434.1,INSD:BP855677.1,INSD:DR324349.1,
INSD:BP855883.1,INSD:ES093589.1,INSD:ES097668.1,
INSD:DR324279.1,INSD:ES145300.1,INSD:EL153620.1,
INSD:DR350346.1,INSD:DR350351.1,INSD:DR324283.1,
INSD:DR324310.1,INSD:ES087768.1,INSD:ES080424.1,
INSD:DR324297.1,INSD:ES108879.1,INSD:ES031213.1,
INSD:BP820418.1,INSD:EL988715.1,INSD:EG428616.1,
INSD:ES131519.1,INSD:DR324338.1,INSD:DR317915.1,
INSD:DR317922.1,INSD:EL110324.1,INSD:ES053050.1,
INSD:ES014109.1,INSD:DR350348.1,INSD:DR324361.1,
INSD:DR324263.1,INSD:EG520608.1,INSD:ES078185.1,
INSD:DR324320.1,INSD:ES057414.1,INSD:DR324357.1,
INSD:ES101224.1,INSD:BP843983.1,INSD:BP848425.1,
INSD:DR380478.1,INSD:ES049188.1,INSD:DR350349.1,
INSD:DR324288.1,INSD:Z18189.1,INSD:BP849579.1,
INSD:DR246179.1,INSD:DR324280.1,INSD:ES066209.1,
INSD:ES053401.1,INSD:BP634451.1,INSD:BP852058.1,
INSD:DR350365.1,INSD:DR324303.1,INSD:BP843804.1,
INSD:DR324328.1,INSD:ES077182.1,INSD:DR324287.1,
INSD:BP650748.1,INSD:ES127347.1,INSD:ES159127.1,
INSD:ES205779.1,INSD:DR350345.1,INSD:DR324319.1,
INSD:DR324271.1,INSD:BP834761.1,INSD:DR324269.1,
INSD:DR225012.1,INSD:ES187989.1,INSD:ES044214.1,
INSD:EG428615.1,INSD:ES132031.1,INSD:DR350347.1,
INSD:BP855564.1,INSD:EL261509.1,INSD:DR324306.1,
INSD:ES116057.1,INSD:ES054950.1,INSD:DR324352.1,
INSD:DR350354.1,INSD:EL982996.1,INSD:EG449074.1,
INSD:DR324270.1,INSD:ES057878.1,INSD:EL118761.1,
INSD:BP819915.1,INSD:BP846031.1,INSD:BP836326.1,
INSD:EL200798.1,INSD:DR324334.1,INSD:DR324313.1,
INSD:DR324304.1,INSD:DR350358.1,INSD:BP819580.1,
INSD:EG428620.1,INSD:DR350344.1,INSD:BP844426.1,
INSD:DR324309.1"
/inference="Similar to RNA sequence, mRNA:INSD:AJ002892.1"
/note="GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2);
FUNCTIONS IN: double-stranded DNA binding, RNA binding,
single-stranded DNA binding, copper ion binding, ATP
binding; INVOLVED IN: response to cold, seed germination,
response to osmotic stress; LOCATED IN: mitochondrion;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition
motif, glycine rich protein (InterPro:IPR015465), RNA
recognition motif, RNP-1 (InterPro:IPR000504),
Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
BEST Arabidopsis thaliana protein match is: glycine-rich
RNA-binding protein 4 (TAIR:AT3G23830.2); Has 51567 Blast
hits to 28871 proteins in 1285 species: Archae - 24;
Bacteria - 5307; Metazoa - 24718; Fungi - 5011; Plants -
11157; Viruses - 197; Other Eukaryotes - 5153 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G13850"
/db_xref="Araport:AT4G13850"
intron_pos 41:1 (1/4)
intron_pos 64:1 (2/4)
intron_pos 100:0 (3/4)
intron_pos 128:1 (4/4)
BEGIN
1 MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD
61 VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE LNGRHIRVNP ANDRPSAPRA
121 YGGGGGYSYG GGGGGYGGGG GGYGGGGDGG GGF
//