LOCUS AEE83324.1 797 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana methionine-tRNA ligase, putative
/ methionyl-tRNA synthetase, putative / MetRS protein.
ACCESSION CP002687-2085
PROTEIN_ID AEE83324.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G13780"
/gene_synonym="F18A5.170"
/gene_synonym="F18A5_170"
/inference="Similar to RNA sequence,
EST:INSD:BP610610.1,INSD:BP563509.1,INSD:EG455648.1,
INSD:BP566938.1,INSD:BP582817.1,INSD:DR354233.1,
INSD:AV545492.1,INSD:BP803823.1,INSD:EL027545.1,
INSD:EH845789.1,INSD:EH934032.1,INSD:EL272852.1,
INSD:ES159335.1,INSD:ES052402.1,INSD:EH960032.1,
INSD:BP619316.1,INSD:AV825492.1,INSD:EH801382.1,
INSD:EH987856.1,INSD:BP581168.1,INSD:BP566332.1,
INSD:BP803360.1,INSD:AV519465.1,INSD:EL264966.1,
INSD:EL109334.1,INSD:AV791401.1,INSD:BP783759.1,
INSD:EL297952.1,INSD:DR354235.1,INSD:DR354231.1,
INSD:BP788818.1,INSD:BP778197.1,INSD:BP566222.1,
INSD:EL981432.1,INSD:DR354232.1,INSD:BP803578.1,
INSD:BP583984.1,INSD:AA042395.1,INSD:DR383711.1,
INSD:BP806444.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY091454.1,INSD:AY064009.1"
/note="methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative; FUNCTIONS IN:
methionine-tRNA ligase activity, tRNA binding,
aminoacyl-tRNA ligase activity, nucleotide binding, ATP
binding; INVOLVED IN: response to cadmium ion,
methionyl-tRNA aminoacylation; LOCATED IN: cytosol;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA
synthetase, class I, conserved site (InterPro:IPR001412),
Nucleic acid-binding, OB-fold (InterPro:IPR012340),
Aminoacyl-tRNA synthetase, class I (M)
(InterPro:IPR015413), Methionyl-tRNA synthetase, class Ia
(InterPro:IPR002304), Aminoacyl-tRNA synthetase, class 1a,
anticodon-binding (InterPro:IPR009080), Rossmann-like
alpha/beta/alpha sandwich fold (InterPro:IPR014729),
Nucleic acid-binding, OB-fold-like (InterPro:IPR016027),
Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I,
anticodon-binding (InterPro:IPR013155), Methionyl-tRNA
synthetase, class Ia, N-terminal (InterPro:IPR014758),
tRNA-binding domain (InterPro:IPR002547); BEST Arabidopsis
thaliana protein match is: Nucleic acid-binding,
OB-fold-like protein (TAIR:AT2G40660.1); Has 17985 Blast
hits to 17920 proteins in 2983 species: Archae - 503;
Bacteria - 10276; Metazoa - 591; Fungi - 596; Plants -
228; Viruses - 3; Other Eukaryotes - 5788 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G13780"
/db_xref="Araport:AT4G13780"
intron_pos 40:1 (1/16)
intron_pos 88:2 (2/16)
intron_pos 140:0 (3/16)
intron_pos 192:0 (4/16)
intron_pos 269:0 (5/16)
intron_pos 317:0 (6/16)
intron_pos 347:1 (7/16)
intron_pos 383:0 (8/16)
intron_pos 423:1 (9/16)
intron_pos 461:0 (10/16)
intron_pos 483:0 (11/16)
intron_pos 526:0 (12/16)
intron_pos 572:0 (13/16)
intron_pos 610:1 (14/16)
intron_pos 688:0 (15/16)
intron_pos 722:0 (16/16)
BEGIN
1 MEDDGKSSPK LPIPGKRNIL ITSALPYVNN VPHLGNIIGC VLSADVYARY CRLRGYNAIY
61 ICGTDEYGTA TETKALEENC TPKEICDKYH AIHKEVYDWF GISFDKFGRT STPEQTEVCQ
121 AIFNKLWDNK WLSENTMQQL YCDTCKKFLA DRLVEGSCPF EGCNYDSARG DQCEKCGKLL
181 NPTELKDPKC KVCQNTPRIR DTDHLFIELP LLKDRLEAYI KKTSVTGSWS QNAIQTTNAW
241 LRDGLRQRCI TRDLKWGVPV PHEKYKDKVF YVWFDAPIGY VSITSCYTSE WEKWWKNPEN
301 VELYQFMGKD NVPFHTVMFP STQLGTEENW TLMKTISVTE YLNYEDGKFS KSKGVGVFGN
361 DVKDTNIPVE VWRYYLLTNR PEVSDTSFSW TDLQAKLNGE LLSNLGNFVN RVLSFIAKPD
421 NAGYGSVIPD AHDAESHSLT KSLAEKVEKF VAEYVEAMEK VKLKQGLKTA MLISSEGNYY
481 LQASQFWKLY KEDKPLCAVV IRTAAGLVHL LAQLLEPFMP SFSCEVFKQL NLPPQFSLSD
541 ERGEVLLASR PWDILPPSHR IGTPQPLFKE LENDEVARYR EKFAGSQSDR RARDEAANLA
601 DQLNKTKLSD AKKQKASSKG GGKPKPQPAA DREITMARLD IRVGKIVKAE KHPKADALYV
661 EEIDVGGGEI RTVVSGLVKY IPLEEMQNRM VCVLCNLKPA KMRDIVSQAM VLAASSSDGS
721 KVELVEPPKT ANIGERVTFP GFEGEPDDVL NPKKKVWETL LVDLNTKENL VACYKDVPFT
781 TSAGVCKVSS ISNGTIR
//