LOCUS AEE83318.1 449 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ypt/Rab-GAP domain of gyp1p superfamily
protein protein.
ACCESSION CP002687-2079
PROTEIN_ID AEE83318.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G13730"
/gene_synonym="F18A5.120"
/gene_synonym="F18A5_120"
/inference="Similar to RNA sequence,
EST:INSD:DR228820.1,INSD:BE523234.1,INSD:ES081503.1,
INSD:DR372488.1,INSD:DR228823.1,INSD:EL313316.1,
INSD:AV440586.1,INSD:DR228822.1,INSD:BG459381.1,
INSD:ES066159.1,INSD:DR228825.1,INSD:ES135447.1,
INSD:EL163247.1,INSD:EL103297.1,INSD:DR228821.1,
INSD:ES211198.1,INSD:DR228824.1,INSD:ES213813.1,
INSD:ES206097.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826487.1,INSD:BX826652.1"
/note="Ypt/Rab-GAP domain of gyp1p superfamily protein;
FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN:
regulation of Rab GTPase activity; LOCATED IN:
intracellular, chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST
Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain
of gyp1p superfamily protein (TAIR:AT1G04830.1); Has 3916
Blast hits to 3820 proteins in 228 species: Archae - 0;
Bacteria - 2; Metazoa - 1945; Fungi - 714; Plants - 575;
Viruses - 0; Other Eukaryotes - 680 (source: NCBI BLink)."
/db_xref="TAIR:AT4G13730"
/db_xref="Araport:AT4G13730"
intron_pos 107:0 (1/8)
intron_pos 138:0 (2/8)
intron_pos 173:0 (3/8)
intron_pos 224:0 (4/8)
intron_pos 257:0 (5/8)
intron_pos 300:0 (6/8)
intron_pos 360:0 (7/8)
intron_pos 399:0 (8/8)
BEGIN
1 MAKKGIPEWL NSSLWSSSPP IDDRHLRNPA ATSITPPSPP IVERPPFSSS PSAISTAPAP
61 PLPVRPPSKS EINDLQNGSG NDGAGIETPA VSSVEDVSRK AQVVAELSKK VIDLKELRKI
121 ASQGLPDDAG IRSIVWKLLL DYLSPDRSLW SSELAKKRSQ YKQFKEELLM NPSEVTRKMD
181 KSKGGDSNDP KIESPGALSR SEITHEDHPL SLGTTSLWNN FFKDTEVLEQ IERDVMRTHP
241 DMHFFSGDSA VAKSNQDALK NILTIFAKLN PGIRYVQGMN EILAPIFYIF KNDPDKGNAA
301 YAESDAFFCF VELMSGFRDN FCQQLDNSVV GIRYTITRLS LLLKHHDEEL WRHLEVTTKI
361 NPQFYAFRWI TLLLTQEFNF VESLHIWDTL LSDPEGPQET LLRICCAMLI LVRRRLLAGD
421 FTSNLKLLQN YPPTNISHML YVADKLRTK
//