LOCUS AEE83309.1 1064 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002687-2064
PROTEIN_ID AEE83309.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G13650"
/gene_synonym="F18A5.40"
/gene_synonym="F18A5_40"
/inference="Similar to RNA sequence,
EST:INSD:EL197681.1,INSD:BX839196.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX827423.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like superfamily
protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026
proteins in 284 species: Archae - 2; Bacteria - 18;
Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0;
Other Eukaryotes - 870 (source: NCBI BLink)."
/db_xref="TAIR:AT4G13650"
/db_xref="Araport:AT4G13650"
intron_pos 45:0 (1/1)
BEGIN
1 MNKYIWLVRL WHSKEEPMFL RSVSSSFIFI HGVPRKLKTR TVFPTLCGTR RASFAAISVY
61 ISEDESFQEK RIDSVENRGI RPNHQTLKWL LEGCLKTNGS LDEGRKLHSQ ILKLGLDSNG
121 CLSEKLFDFY LFKGDLYGAF KVFDEMPERT IFTWNKMIKE LASRNLIGEV FGLFVRMVSE
181 NVTPNEGTFS GVLEACRGGS VAFDVVEQIH ARILYQGLRD STVVCNPLID LYSRNGFVDL
241 ARRVFDGLRL KDHSSWVAMI SGLSKNECEA EAIRLFCDMY VLGIMPTPYA FSSVLSACKK
301 IESLEIGEQL HGLVLKLGFS SDTYVCNALV SLYFHLGNLI SAEHIFSNMS QRDAVTYNTL
361 INGLSQCGYG EKAMELFKRM HLDGLEPDSN TLASLVVACS ADGTLFRGQQ LHAYTTKLGF
421 ASNNKIEGAL LNLYAKCADI ETALDYFLET EVENVVLWNV MLVAYGLLDD LRNSFRIFRQ
481 MQIEEIVPNQ YTYPSILKTC IRLGDLELGE QIHSQIIKTN FQLNAYVCSV LIDMYAKLGK
541 LDTAWDILIR FAGKDVVSWT TMIAGYTQYN FDDKALTTFR QMLDRGIRSD EVGLTNAVSA
601 CAGLQALKEG QQIHAQACVS GFSSDLPFQN ALVTLYSRCG KIEESYLAFE QTEAGDNIAW
661 NALVSGFQQS GNNEEALRVF VRMNREGIDN NNFTFGSAVK AASETANMKQ GKQVHAVITK
721 TGYDSETEVC NALISMYAKC GSISDAEKQF LEVSTKNEVS WNAIINAYSK HGFGSEALDS
781 FDQMIHSNVR PNHVTLVGVL SACSHIGLVD KGIAYFESMN SEYGLSPKPE HYVCVVDMLT
841 RAGLLSRAKE FIQEMPIKPD ALVWRTLLSA CVVHKNMEIG EFAAHHLLEL EPEDSATYVL
901 LSNLYAVSKK WDARDLTRQK MKEKGVKKEP GQSWIEVKNS IHSFYVGDQN HPLADEIHEY
961 FQDLTKRASE IGYVQDCFSL LNELQHEQKD PIIFIHSEKL AISFGLLSLP ATVPINVMKN
1021 LRVCNDCHAW IKFVSKVSNR EIIVRDAYRF HHFEGGACSC KDYW
//