LOCUS AEE83270.1 421 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ATP-dependent caseinolytic (Clp)
protease/crotonase family protein protein.
ACCESSION CP002687-2013
PROTEIN_ID AEE83270.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G13360"
/gene_synonym="T9E8.100"
/gene_synonym="T9E8_100"
/inference="Similar to RNA sequence,
EST:INSD:ES196327.1,INSD:BP587510.1,INSD:ES068881.1,
INSD:EL223094.1,INSD:EL309003.1,INSD:AV821331.1,
INSD:DR383599.1,INSD:EL254363.1,INSD:EG478410.1,
INSD:EL988576.1,INSD:BP857797.1,INSD:EL336962.1,
INSD:DR279252.1,INSD:ES170427.1,INSD:EL243233.1,
INSD:EL972997.1,INSD:ES198352.1,INSD:BP785903.1,
INSD:DR378823.1,INSD:ES202928.1,INSD:DR279253.1,
INSD:EG504186.1,INSD:EL240137.1,INSD:ES086675.1,
INSD:AV781728.1,INSD:EL080081.1,INSD:EG503508.1,
INSD:ES084230.1,INSD:AU229010.1,INSD:DR279254.1,
INSD:ES124905.1,INSD:ES212399.1,INSD:EL980131.1,
INSD:EH994463.1,INSD:EL108931.1,INSD:EL242424.1,
INSD:BP794705.1,INSD:BP845067.1,INSD:Z24510.1,
INSD:ES163169.1,INSD:EH803226.1,INSD:EG527051.1,
INSD:EG527052.1,INSD:ES000882.1,INSD:EL110052.1,
INSD:EH859414.1,INSD:EH816957.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF380642.1,INSD:AY057737.1,INSD:AY084255.1,
INSD:BX827375.1,INSD:BX827365.1"
/note="ATP-dependent caseinolytic (Clp) protease/crotonase
family protein; FUNCTIONS IN: catalytic activity; INVOLVED
IN: metabolic process; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST
Arabidopsis thaliana protein match is: ATP-dependent
caseinolytic (Clp) protease/crotonase family protein
(TAIR:AT3G24360.1); Has 20226 Blast hits to 20218 proteins
in 1812 species: Archae - 355; Bacteria - 13945; Metazoa -
843; Fungi - 613; Plants - 486; Viruses - 0; Other
Eukaryotes - 3984 (source: NCBI BLink)."
/db_xref="TAIR:AT4G13360"
/db_xref="Araport:AT4G13360"
intron_pos 76:1 (1/9)
intron_pos 110:1 (2/9)
intron_pos 132:0 (3/9)
intron_pos 177:0 (4/9)
intron_pos 209:1 (5/9)
intron_pos 252:2 (6/9)
intron_pos 312:1 (7/9)
intron_pos 355:0 (8/9)
intron_pos 389:0 (9/9)
BEGIN
1 MIIIKTLSHR IFFPKFSQTF SSQFHQTLRF SISDRRKFSA MAGAGVDDFV KGNVFPNGVA
61 LITLDRTKAL NAMNLDMDIK YKSFLDEWES DPRVKCVIVE GSTSRAFCAG MDIKGVAAEI
121 QKDKNTPLVQ KVFTAEYTLI CAIAAYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL
181 AMPENGIGLF PDVGFSYIAA HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL
241 ASLKEAILSA NLSEDPNQDI QATLSKYSSN PESEAHLKSL LPHIESAFSS NKSIKETIEE
301 LKKYQQSTES SVVEWANEAL KGLEKGAPFS LYLTQKYFSN VACAKSKPEN ELATLNGVMK
361 TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPTSIEEV DENEVEALFK PLSPEVEELK
421 V
//