LOCUS AEE83269.1 602 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NSP (nuclear shuttle protein)-interacting
GTPase protein.
ACCESSION CP002687-2012
PROTEIN_ID AEE83269.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="NIG"
/locus_tag="AT4G13350"
/gene_synonym="NSP (nuclear shuttle protein)-interacting
GTPase"
/gene_synonym="T9E8.90"
/gene_synonym="T9E8_90"
/inference="Similar to RNA sequence,
EST:INSD:AV814131.1,INSD:EH847769.1,INSD:BP793811.1,
INSD:AV520816.1,INSD:F14200.1,INSD:EL995739.1,
INSD:ES107914.1,INSD:AV792629.1,INSD:AV791468.1,
INSD:BP601933.1,INSD:BP782167.1,INSD:ES119235.1,
INSD:ES150334.1,INSD:EH932604.1,INSD:AV785916.1,
INSD:ES083429.1,INSD:AV809771.1,INSD:BP609336.1,
INSD:AV832194.1,INSD:BP619855.1,INSD:AV811173.1,
INSD:BX839735.1,INSD:EG465820.1,INSD:EG465819.1,
INSD:DR371612.1,INSD:EH805960.1,INSD:CD530112.1,
INSD:EH961523.1,INSD:AV788646.1,INSD:BP791720.1,
INSD:ES155538.1,INSD:AV824378.1,INSD:EH969425.1,
INSD:EH941912.1,INSD:BP782018.1,INSD:EL266090.1,
INSD:DR182949.1,INSD:ES017000.1,INSD:BP779464.1,
INSD:BX840708.1,INSD:EH808914.1,INSD:AV557115.1,
INSD:DR182950.1,INSD:F14176.1,INSD:AV562597.1,
INSD:DR182951.1,INSD:EH875101.1,INSD:EG501585.1,
INSD:AV813083.1,INSD:BP609186.1,INSD:BP779829.1,
INSD:AV812543.1,INSD:EL032452.1,INSD:AV547958.1,
INSD:EH926014.1,INSD:ES170396.1,INSD:EH900533.1,
INSD:ES200192.1,INSD:BP787705.1,INSD:ES016848.1,
INSD:AV807368.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT008379.1"
/note="NSP (nuclear shuttle protein)-interacting GTPase
(NIG); FUNCTIONS IN: GTP binding, GTPase activity;
INVOLVED IN: nucleocytoplasmic transport, response to
virus; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN:
flower, root, cultured cell, leaf; EXPRESSED DURING:
seedling growth; CONTAINS InterPro DOMAIN/s: Arf GTPase
activating protein (InterPro:IPR001164); BEST Arabidopsis
thaliana protein match is: ArfGap/RecO-like zinc finger
domain-containing protein (TAIR:AT4G32630.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G13350"
/db_xref="Araport:AT4G13350"
intron_pos 34:0 (1/11)
intron_pos 54:2 (2/11)
intron_pos 84:0 (3/11)
intron_pos 104:2 (4/11)
intron_pos 259:0 (5/11)
intron_pos 393:0 (6/11)
intron_pos 438:0 (7/11)
intron_pos 474:0 (8/11)
intron_pos 501:0 (9/11)
intron_pos 545:1 (10/11)
intron_pos 558:2 (11/11)
BEGIN
1 MAGRVKEDEK NEKIIRSLLK LPENKRCINC NSLGPQYVCT TFWTFVCTNC SGIHREFTHR
61 VKSISMAKFT SQEVTALKEG GNQHAKDIYF KGLDQQRQSV PDGSNVERLR DFIRHVYVNK
121 RYTNEKNDDK SPSETRSSSG SRSPPYEDGY DRRYGDRSSP GGRSPGFETG SRNAVNNRKS
181 PARPEILNDW RREDRFGGRK TSEEGSQSPE QVKDLGSASP PVARPVREIL GDSVIPLRVG
241 EPPKPPVSRN TDASAHAKSG TSLSSLMSTN EKPPEVKLET ALSLIDFDTD FETPAPSVAI
301 QAPLSTTSQP APQPTTSSND NWASFDAAPS APSLNVSQPP PSGNTLDSLL SQLAVTSSVP
361 GQASTPSNGP VNLGHSTSQI FAPFQNEHSS EQPWNTALAS NVQRSMSAPS LQPLQGVPSG
421 GLQSSEVKPS GRSELPADLF AVNYPSYHAP VPGWQAGPPH AMHYGMQQYN NPVPYQNVPQ
481 PGKSMNPFDF SPGPPSQTQT ENMFPSMAPL QGALPPSGMM PSQGVHNQFN IPSQGSAHPS
541 AMPPRYMPSQ IPGSMPPSNV NPIGDINTSY DTQQTYQNFG SSFAAAVPLN PPSFQSGGNP
601 FG
//