LOCUS AEE83240.1 206 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L13 family protein protein.
ACCESSION CP002687-1966
PROTEIN_ID AEE83240.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G13170"
/gene_synonym="F17N18.60"
/gene_synonym="F17N18_60"
/inference="Similar to RNA sequence,
EST:INSD:EL119975.1,INSD:BP833547.1,INSD:AV812986.1,
INSD:EL018510.1,INSD:EL151154.1,INSD:ES192683.1,
INSD:BP788009.1,INSD:DR232157.1,INSD:EL272971.1,
INSD:EL222241.1,INSD:BP782472.1,INSD:EL307279.1,
INSD:EL317089.1,INSD:EL073792.1,INSD:BP820124.1,
INSD:EH874161.1,INSD:ES041037.1,INSD:EL166310.1,
INSD:AV830779.1,INSD:EL330369.1,INSD:DR355784.1,
INSD:EH837860.1,INSD:EL177714.1,INSD:EL308193.1,
INSD:AI999348.1,INSD:EL317443.1,INSD:EL283482.1,
INSD:EL095199.1,INSD:EH812626.1,INSD:EL288545.1,
INSD:BP578064.1,INSD:BP609093.1,INSD:AV557591.1,
INSD:ES120962.1,INSD:BP635722.1,INSD:EL276887.1,
INSD:EH966047.1,INSD:AV558463.1,INSD:BP848761.1,
INSD:EL037551.1,INSD:EL202893.1,INSD:EL328557.1,
INSD:EL084936.1,INSD:EL995438.1,INSD:ES193540.1,
INSD:EH984270.1,INSD:EH909682.1,INSD:EL101240.1,
INSD:EL291601.1,INSD:EL146979.1,INSD:EH944359.1,
INSD:EG520267.1,INSD:EL233604.1,INSD:EL040266.1,
INSD:BP805288.1,INSD:EH977413.1,INSD:EL122604.1,
INSD:ES142025.1,INSD:BP855276.1,INSD:EL086702.1,
INSD:EH815845.1,INSD:EH950790.1,INSD:BP823189.1,
INSD:EL333841.1,INSD:BP567523.1,INSD:ES209619.1,
INSD:EH972969.1,INSD:AV787962.1,INSD:EL216992.1,
INSD:EL187971.1,INSD:EL080677.1,INSD:EH981965.1,
INSD:BP579742.1,INSD:EH993126.1,INSD:EL021065.1,
INSD:EL043129.1,INSD:EL053968.1,INSD:EL089725.1,
INSD:ES190847.1,INSD:EL023907.1,INSD:ES200870.1,
INSD:EG520268.1,INSD:EL129728.1,INSD:ES170126.1,
INSD:EH955114.1,INSD:EH865185.1,INSD:EH881724.1,
INSD:EL066920.1,INSD:EH866302.1,INSD:BP840156.1,
INSD:BP567790.1,INSD:BP806186.1,INSD:EH814252.1,
INSD:EH816666.1,INSD:EL227387.1,INSD:EL127911.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829366.1,INSD:AY060518.1,INSD:AY052263.1,
INSD:BX828350.1"
/note="Ribosomal protein L13 family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: ribosome, cytosolic large
ribosomal subunit, membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein L13
(InterPro:IPR005822), Ribosomal protein L13,
eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis
thaliana protein match is: Ribosomal protein L13 family
protein (TAIR:AT5G48760.2); Has 1983 Blast hits to 1983
proteins in 630 species: Archae - 297; Bacteria - 430;
Metazoa - 343; Fungi - 199; Plants - 322; Viruses - 0;
Other Eukaryotes - 392 (source: NCBI BLink)."
/db_xref="TAIR:AT4G13170"
/db_xref="Araport:AT4G13170"
intron_pos 91:2 (1/3)
intron_pos 130:2 (2/3)
intron_pos 160:0 (3/3)
BEGIN
1 MVSGSGICAK RVVVDGRHHM LGRLASNTAK ELLNGQEVVV VRCEEICLSG GLVRQKMKYM
61 RFLRKRMNTK PSHGPIHFRA PSKIFWRTVR GMIPHKTKRG AAALARLKVF EGIPPPYDKI
121 KRMVIPDALK VLRLQSGHKY CLLGRLSSEV GWNHYDTIKE LETKRKERSQ VMYERKKQLN
181 KLRTKAEKVA EERLGSQLDV LAPVKY
//