LOCUS AEE83161.1 499 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002687-1848
PROTEIN_ID AEE83161.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G12670"
/gene_synonym="T20K18.20"
/gene_synonym="T20K18_20"
/inference="Similar to RNA sequence,
EST:INSD:ES189580.1,INSD:ES083446.1,INSD:EL989065.1,
INSD:T46639.1,INSD:EG502982.1,INSD:EL206176.1,
INSD:ES205681.1,INSD:ES202726.1,INSD:EG514928.1,
INSD:EH907377.1,INSD:CD530323.1,INSD:EG514929.1,
INSD:EL083290.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY550301.1,INSD:AJ630488.1,INSD:AY568660.1"
/note="Homeodomain-like superfamily protein; FUNCTIONS IN:
DNA binding; INVOLVED IN: response to jasmonic acid
stimulus, response to salicylic acid stimulus; CONTAINS
InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
Homeodomain-related (InterPro:IPR012287), MYB-like
(InterPro:IPR017877); BEST Arabidopsis thaliana protein
match is: TRF-like 10 (TAIR:AT5G03780.1); Has 538 Blast
hits to 521 proteins in 95 species: Archae - 0; Bacteria -
1; Metazoa - 236; Fungi - 18; Plants - 123; Viruses - 0;
Other Eukaryotes - 160 (source: NCBI BLink)."
/db_xref="TAIR:AT4G12670"
/db_xref="Araport:AT4G12670"
intron_pos 411:2 (1/2)
intron_pos 430:0 (2/2)
BEGIN
1 MLTDKSRKGC RESLGGVDVG LMMEKEAGGV ENVVEVNVSG ASGMVSGKRR EGDGLNNKWI
61 VIEKSQKMQK VAAETHSREN SKADDIDSDK GRKQRGRFNE KNYEISYACI SNAGEGRKGR
121 VRRGNEKNHQ APEAHSIDVG GERKRQRRCD DINHEKAQPH SFAVGIKTKE KRRYSEKNQQ
181 NKTVATTHEH DVLTNDGRTE ARDSDFGEGR SGQGCFHENN QQTKVSSTER CEQEIPRTNK
241 RVSLGSGLGE GRYREGRHIE KNQHTETVKT ETHGKEVSKD RKRKRERGVE RDGDEFYLAE
301 NQDRQCQADM RNDDVAFNKQ ATGFSTVEQV ERKSVSSISS PESTNNVNDP NVAFQELALI
361 IHPKAGVQEQ PIEARPLRSV SSKKPSFQPE KYGHKSYLEK NGPASNDPAQ SATKRKRRFW
421 TLAEVEMLRV GVQKFPGERN IPWRKILQFG RDVFHDERAP SDLKDKWKTL NKIPSDTGKW
481 VSLSTERQPN YYVSEVSSE
//