LOCUS AEE83153.1 128 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L7Ae/L30e/S12e/
Gadd45 family protein protein.
ACCESSION CP002687-1837
PROTEIN_ID AEE83153.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G12600"
/gene_synonym="T1P17.190"
/gene_synonym="T1P17_190"
/inference="Similar to RNA sequence,
EST:INSD:DR375138.1,INSD:BP856942.1,INSD:AI996292.1,
INSD:EG510622.1,INSD:AV797509.1,INSD:BP653365.1,
INSD:BP798342.1,INSD:DR334443.1,INSD:DR334456.1,
INSD:EL976603.1,INSD:DR334463.1,INSD:EH876776.1,
INSD:BP662573.1,INSD:DR334442.1,INSD:EL025816.1,
INSD:BP845489.1,INSD:DR334445.1,INSD:DR334462.1,
INSD:ES208899.1,INSD:AV566640.1,INSD:ES152712.1,
INSD:EH811901.1,INSD:BP578996.1,INSD:DR334459.1,
INSD:DR334441.1,INSD:ES211930.1,INSD:BP833746.1,
INSD:EG501997.1,INSD:EL136441.1,INSD:T14197.1,
INSD:ES143500.1,INSD:ES030640.1,INSD:DR334448.1,
INSD:DR334458.1,INSD:DR334464.1,INSD:DR334460.1,
INSD:EL135262.1,INSD:EH837282.1,INSD:ES063370.1,
INSD:ES049147.1,INSD:DR334454.1,INSD:DR334449.1,
INSD:BP829916.1,INSD:EL127810.1,INSD:EL291784.1,
INSD:AV555858.1,INSD:ES196546.1,INSD:EH821105.1,
INSD:DR334461.1,INSD:BP851602.1,INSD:ES153352.1,
INSD:EL102323.1,INSD:BP644290.1,INSD:DR334452.1,
INSD:BP833512.1,INSD:DR334453.1,INSD:EL037344.1,
INSD:ES091862.1,INSD:EL333767.1,INSD:DR334447.1,
INSD:DR334465.1,INSD:DR334457.1,INSD:ES071942.1,
INSD:ES003646.1,INSD:BP629390.1,INSD:H76484.1,
INSD:DR334450.1,INSD:EG501996.1,INSD:DR224680.1,
INSD:DR334455.1,INSD:AV557550.1,INSD:EL154300.1,
INSD:BE662756.1,INSD:ES097768.1,INSD:EG510623.1,
INSD:BP814249.1,INSD:ES204479.1,INSD:AV827202.1,
INSD:CF651794.1,INSD:DR334451.1,INSD:ES084995.1,
INSD:ES213971.1,INSD:ES168968.1,INSD:EH963665.1,
INSD:DR334446.1,INSD:ES115197.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY055095.1,INSD:AF361618.1,INSD:AY087261.1"
/note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome
biogenesis; LOCATED IN: ribonucleoprotein complex;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: H/ACA
ribonucleoprotein complex, subunit Nhp2, eukaryote
(InterPro:IPR002415), Ribosomal protein L7Ae/L8/Nhp2
family (InterPro:IPR018492), Ribosomal protein
L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038), Ribosomal
protein L7Ae conserved site (InterPro:IPR004037); BEST
Arabidopsis thaliana protein match is: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT5G20160.1);
Has 1766 Blast hits to 1766 proteins in 400 species:
Archae - 342; Bacteria - 0; Metazoa - 560; Fungi - 254;
Plants - 271; Viruses - 0; Other Eukaryotes - 339 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G12600"
/db_xref="Araport:AT4G12600"
intron_pos 77:0 (1/1)
BEGIN
1 MTVEGVNPKA YPLADSQLSI TILDLVQQAT NYKQLKKGAN EATKTLNRGI SEFIVMAADT
61 EPLEILLHLP LLAEDKNVPY VFVPSKQALG RACDVTRPVI ACSVTSNEAS QLKSQIQHLK
121 DAIEKLLI
//