LOCUS AEE83149.1 873 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin protein ligase 5 protein.
ACCESSION CP002687-1832
PROTEIN_ID AEE83149.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="UPL5"
/locus_tag="AT4G12570"
/gene_synonym="T1P17.160"
/gene_synonym="T1P17_160"
/gene_synonym="ubiquitin protein ligase 5"
/inference="Similar to RNA sequence,
EST:INSD:ES117529.1,INSD:AV564048.1,INSD:EL104928.1,
INSD:EG523065.1,INSD:BP604909.1,INSD:ES154469.1,
INSD:ES043913.1,INSD:AV528677.1,INSD:AA651328.1,
INSD:EL058733.1,INSD:BE526386.1,INSD:ES079601.1,
INSD:ES152376.1,INSD:EH827887.1,INSD:AU237716.1,
INSD:BP621421.1,INSD:AU228803.1,INSD:ES119848.1,
INSD:EL025043.1,INSD:EL268211.1,INSD:ES167827.1,
INSD:ES177515.1,INSD:ES009114.1,INSD:ES101457.1,
INSD:ES087356.1,INSD:BP806231.1,INSD:AV523091.1,
INSD:BP609691.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK229227.1"
/note="ubiquitin protein ligase 5 (UPL5); CONTAINS
InterPro DOMAIN/s: Ubiquitin subgroup
(InterPro:IPR019956), Ubiquitin (InterPro:IPR000626),
Ubiquitin supergroup (InterPro:IPR019955), HECT
(InterPro:IPR000569); BEST Arabidopsis thaliana protein
match is: ubiquitin-protein ligase 1 (TAIR:AT1G55860.1);
Has 13201 Blast hits to 8328 proteins in 676 species:
Archae - 0; Bacteria - 15; Metazoa - 6234; Fungi - 1825;
Plants - 2664; Viruses - 167; Other Eukaryotes - 2296
(source: NCBI BLink)."
/db_xref="TAIR:AT4G12570"
/db_xref="Araport:AT4G12570"
intron_pos 589:1 (1/2)
intron_pos 787:0 (2/2)
BEGIN
1 MTLSRSSADD STNNANRSYS AVAGTDNKRK RDEDSSDYVG VAESLEMLKK QEIDADHMAA
61 SAQQTLISWR SGENSRSLSS SGECSSSNRP ESTRLQIFVR MMSGGKTIVI HAEKYDTVEK
121 LHQRIEWKTK IPALEQRVIY KGKQLQRENS LTYYSIEQDA SLQLVARMQS TEHPVAWQTI
181 DDIMYTISRM YKGENLQSNI NEKIVTFFAM IPVESDESIA KYLNIFSNSS VPAALVMLYA
241 SSLERNKSCA KSSVKLFLSN CVALPKNQKN YCLPIVLEFC KLLRKVCPDQ KLYVTCRNTL
301 GSMLETFDNP HGVYNDQYET FGVEIFPFFT ELTGLLLNEL AQNSGPSFCD FQKVSSFWQQ
361 LRKVIELKVA FPIPIVLPMQ STALEAEIRH LHRLFGSLLT TMDLCMCRVE SSLADKEVGN
421 SETMSSSWSQ YLSILKIINS MSNIYQGAKG QLAVMLNKNK VSFSALVVKF AKRGDDHQWI
481 FEYKEATNFE ARRHLAMLLF PDVKEDFEEM HEMLIDRSNL LSESFEYIVG ASPEALHGGL
541 FMEFKNEEAT GPGVLREWFY LVCQEIFNPK NTLFLRSADD FRRFSPNPAS KVDPLHPDFF
601 EFTGRVIALA LMHKVQVGVL FDRVFFLQLA GLKISLEDIK DTDRIMYNSC KQILEMDPEF
661 FDSNAGLGLT FVLETEELGK RDTIELCPDG KLKAVNSKNR KQYVDLLIER RFATPILEQV
721 KQFSRGFTDM LSHSVPPRSF FKRLYLEDLD GMLRGGENPI SIDDWKAHTE YNGFKETDRQ
781 IDWFWKILKK MTEEEQRSIL FFWTSNKFVP VEGFRGLSSK LYIYRLYEAN DRLPLSHTCF
841 YRLCIPRYPT ITLMEQRLRL IAQDHVSSSF GKW
//