LOCUS AEE83128.1 587 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Cupredoxin superfamily protein protein.
ACCESSION CP002687-1794
PROTEIN_ID AEE83128.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SKU5"
/locus_tag="AT4G12420"
/gene_synonym="T1P17.10"
/gene_synonym="T1P17_10"
/inference="Similar to RNA sequence,
EST:INSD:ES213687.1,INSD:BP577430.1,INSD:AV524439.1,
INSD:EL213185.1,INSD:AU226556.1,INSD:EL136672.1,
INSD:ES038969.1,INSD:EL217678.1,INSD:EL328138.1,
INSD:ES009186.1,INSD:BP846190.1,INSD:EL138292.1,
INSD:EL169824.1,INSD:DR255927.1,INSD:BP793917.1,
INSD:EL049520.1,INSD:EL334411.1,INSD:EL276609.1,
INSD:EH876861.1,INSD:AV563430.1,INSD:EL108857.1,
INSD:BP612157.1,INSD:EL179957.1,INSD:DR378250.1,
INSD:EH824513.1,INSD:EL268350.1,INSD:BP653930.1,
INSD:EH912977.1,INSD:EL312408.1,INSD:ES155242.1,
INSD:EL158068.1,INSD:EH848112.1,INSD:BP783899.1,
INSD:EL241494.1,INSD:ES162008.1,INSD:EL296168.1,
INSD:ES096154.1,INSD:ES146737.1,INSD:BP842265.1,
INSD:BP655935.1,INSD:EL983762.1,INSD:BP780183.1,
INSD:ES140899.1,INSD:EL031145.1,INSD:EL232653.1,
INSD:EL162682.1,INSD:EL264914.1,INSD:AV542451.1,
INSD:EH828825.1,INSD:AV547744.1,INSD:EH880192.1,
INSD:EL114865.1,INSD:DR255929.1,INSD:EH873055.1,
INSD:EL262128.1,INSD:ES056717.1,INSD:EL228414.1,
INSD:EL987203.1,INSD:EH814685.1,INSD:ES141923.1,
INSD:ES156820.1,INSD:EH929804.1,INSD:EL119234.1,
INSD:EL265907.1,INSD:BP593679.1,INSD:ES196962.1,
INSD:EL079023.1,INSD:ES099184.1,INSD:EH865658.1,
INSD:EL237871.1,INSD:EL278369.1,INSD:EL000965.1,
INSD:EL063552.1,INSD:EL284279.1,INSD:R30492.1,
INSD:EH944720.1,INSD:EL338137.1,INSD:EH906121.1,
INSD:EL206646.1,INSD:ES044089.1,INSD:EH954715.1,
INSD:AU235793.1,INSD:EH868008.1,INSD:EL205901.1,
INSD:BP611208.1,INSD:BP817080.1,INSD:EL012787.1,
INSD:DR360380.1,INSD:ES162663.1,INSD:EL992203.1,
INSD:EH932965.1,INSD:EL146298.1,INSD:AV828338.1,
INSD:ES205545.1,INSD:ES182840.1,INSD:EL277180.1,
INSD:ES140746.1,INSD:EH832197.1,INSD:BP652186.1,
INSD:DR266075.1,INSD:EH962257.1,INSD:DR255928.1,
INSD:EL331135.1,INSD:EL115021.1,INSD:ES077344.1,
INSD:EL182272.1,INSD:EL012270.1,INSD:EH920245.1,
INSD:EL132690.1,INSD:EL193754.1,INSD:ES006962.1,
INSD:EL299628.1,INSD:EH971411.1,INSD:ES039478.1,
INSD:ES098533.1,INSD:EL103614.1,INSD:EH889644.1,
INSD:CB254499.1,INSD:EL026167.1,INSD:ES067843.1,
INSD:ES004761.1,INSD:Z37701.1,INSD:BP606649.1,
INSD:BP791711.1,INSD:EH952593.1,INSD:ES090276.1,
INSD:EL195328.1,INSD:EL027986.1,INSD:EH986983.1,
INSD:EL992434.1,INSD:EL071008.1,INSD:BP659587.1,
INSD:ES018256.1,INSD:EH910174.1,INSD:EL046271.1,
INSD:EL015834.1,INSD:EL188704.1,INSD:BP791219.1,
INSD:AV563154.1,INSD:EL987195.1,INSD:ES036577.1,
INSD:EH969637.1,INSD:EH864581.1,INSD:EH848510.1,
INSD:ES173417.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF083740.1,INSD:AF439406.1,INSD:AK227873.1,
INSD:AK229975.1"
/note="SKU5; FUNCTIONS IN: oxidoreductase activity, copper
ion binding; INVOLVED IN: cell tip growth; LOCATED IN: in
7 components; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Multicopper oxidase, type 3 (InterPro:IPR011707),
Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type
2 (InterPro:IPR011706), Multicopper oxidase, type 1
(InterPro:IPR001117); BEST Arabidopsis thaliana protein
match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 6156
Blast hits to 6132 proteins in 1213 species: Archae - 8;
Bacteria - 2095; Metazoa - 284; Fungi - 2301; Plants -
1268; Viruses - 0; Other Eukaryotes - 200 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G12420"
/db_xref="Araport:AT4G12420"
intron_pos 45:0 (1/8)
intron_pos 81:2 (2/8)
intron_pos 172:0 (3/8)
intron_pos 218:1 (4/8)
intron_pos 340:2 (5/8)
intron_pos 462:2 (6/8)
intron_pos 489:0 (7/8)
intron_pos 555:2 (8/8)
BEGIN
1 MDLFKILLLV FFVNISFCFA ADPYSFYNFE VSYITASPLG VPQQVIAING KFPGPTINVT
61 TNENLVVNVR NKLDEGLLLH WNGIQQRRVS WQDGVLGTNC PIPPKWNWTY EFQVKDQIGS
121 FFYFPSLHFQ RASGGFGSFV VNPRAIIPVP FSTPDGDITV TIGDWYIRNH TALRKALDDG
181 KDLGMPDGVL INGKGPYRYN DTLVADGIDF ETITVHPGKT YRLRVSNVGI STSLNFRIQG
241 HNLVLAESEG SYTVQQNYTS LDIHVGQSYS FLVTMDQNAS SDYYIVASAR VVNETIWRRV
301 TGVGILKYTN SKGKAKGQLP PGPQDEFDKT FSMNQARSIR WNVSASGARP NPQGSFKYGS
361 INVTDVYVLR NMPPVTISGK RRTTLNGISF KNPSTPIRLA DKLKVKDVYK LDFPKRPLTG
421 PAKVATSIIN GTYRGFMEVV LQNNDTKMQS YHMSGYAFFV VGMDYGEWTE NSRGTYNKWD
481 GIARSTIQVY PGAWSAILIS LDNPGAWNLR TENLDSWYLG QETYVRVVNP DENNKTEFGH
541 PDNVLYCGAL SKLQKPQKVS SSASKSIGFT SLSMVVMALV MMMMLQH
//