LOCUS AEE83074.1 313 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PGR5-like B protein.
ACCESSION CP002687-1721
PROTEIN_ID AEE83074.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PGRL1B"
/locus_tag="AT4G11960"
/gene_synonym="F16J13.30"
/gene_synonym="F16J13_30"
/gene_synonym="PGR5-like B"
/inference="Similar to RNA sequence,
EST:INSD:DR373447.1,INSD:DR252519.1,INSD:DR252524.1,
INSD:DR252514.1,INSD:DR252511.1,INSD:EL231002.1,
INSD:DR252518.1,INSD:AU229762.1,INSD:DR252505.1,
INSD:EH826729.1,INSD:DR252507.1,INSD:EH895560.1,
INSD:AV555596.1,INSD:BP783269.1,INSD:DR252508.1,
INSD:EH835790.1,INSD:EL305686.1,INSD:BP630221.1,
INSD:BE662773.1,INSD:AU238570.1,INSD:DR252506.1,
INSD:EL087428.1,INSD:EL070620.1,INSD:EL262520.1,
INSD:ES116461.1,INSD:BP810307.1,INSD:EH951700.1,
INSD:DR252512.1,INSD:EL126114.1,INSD:EL284307.1,
INSD:DR252515.1,INSD:DR252513.1,INSD:EG421329.1,
INSD:EL202805.1,INSD:EH812744.1,INSD:DR252522.1,
INSD:EL106289.1,INSD:ES063212.1,INSD:DR252520.1,
INSD:EH873729.1,INSD:BP844395.1,INSD:CB261449.1,
INSD:EH987017.1,INSD:EL134208.1,INSD:EG421331.1,
INSD:AV566611.1,INSD:DR252521.1,INSD:DR252523.1,
INSD:DR252517.1,INSD:AV554453.1,INSD:DR252516.1,
INSD:EH797801.1,INSD:EH946841.1,INSD:ES210902.1,
INSD:CK121196.1,INSD:DR252509.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK117721.1,INSD:BT005305.1,INSD:BX827823.1,
INSD:BX826930.1"
/note="PGR5-like B (PGRL1B); FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: photosynthetic
electron transport in photosystem I, photosynthesis;
LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: PGR5-LIKE A
(TAIR:AT4G22890.2); Has 111 Blast hits to 111 proteins in
24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink)."
/db_xref="TAIR:AT4G11960"
/db_xref="Araport:AT4G11960"
intron_pos 56:1 (1/9)
intron_pos 94:0 (2/9)
intron_pos 126:1 (3/9)
intron_pos 160:0 (4/9)
intron_pos 179:0 (5/9)
intron_pos 204:2 (6/9)
intron_pos 222:0 (7/9)
intron_pos 259:0 (8/9)
intron_pos 291:2 (9/9)
BEGIN
1 MAFTLTIPRF SAISRKPITC SSSRTQCPAP FTHGRSISLR RRLTLLPLKA STDQSGQVGG
61 EEVDSKILPY CSINKNEKRT IGEMEQEFLQ AMQSFYYEGK AIMSNEEFDN LKEELMWEGS
121 SVVMLSSDEQ RFLEASMAYV SGNPILSDEE YDKLKMKLKM DGSEIVCEGP RCSLRSKKVY
181 SDLAIDYFKM FLLNVPATVV ALGLFFFLDD ITGFEITYLL ELPEPFSFIF TWFAAVPAIV
241 YLALSLTKLI LKDFLILKGP CPNCGTENVS FFGTILSIPN DSNTNNVKCS GCGTEMVYDS
301 GSRLITLPEG GKA
//