LOCUS AEE83054.1 824 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phospholipase D gamma 2 protein.
ACCESSION CP002687-1686
PROTEIN_ID AEE83054.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PLDGAMMA2"
/locus_tag="AT4G11830"
/gene_synonym="AT4G11835"
/gene_synonym="phospholipase D gamma 2"
/gene_synonym="T26M18.40"
/gene_synonym="T26M18_40"
/inference="Similar to RNA sequence,
EST:INSD:AU236338.1,INSD:BX839471.1,INSD:BP563632.1,
INSD:BP863595.1,INSD:BP802835.1,INSD:AU229709.1,
INSD:BP805372.1,INSD:BP863132.1,INSD:BP603154.1,
INSD:BP599070.1,INSD:EG453257.1,INSD:BP616135.1,
INSD:BP617574.1,INSD:BP616854.1,INSD:ES019447.1,
INSD:AU238517.1,INSD:BP793504.1,INSD:BP804851.1,
INSD:BP560971.2,INSD:DR311172.1,INSD:BP796938.1,
INSD:CB263227.1,INSD:AV784122.1,INSD:BP607952.1,
INSD:DR363838.1,INSD:BP621640.1,INSD:BX835624.1,
INSD:CB074929.1,INSD:CF651925.1,INSD:BP578684.1,
INSD:AU227237.1,INSD:ES082575.1,INSD:BP563758.1,
INSD:BP807174.1,INSD:BP794582.1,INSD:DR373815.1,
INSD:AI996820.1,INSD:BP603422.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK117675.1,INSD:AY086364.1,INSD:AY097359.1,
INSD:AY050322.1"
/note="phospholipase D gamma 2 (PLDGAMMA2); FUNCTIONS IN:
phospholipase D activity; INVOLVED IN: phospholipid
catabolic process; LOCATED IN: cytosolic ribosome,
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2
membrane targeting protein (InterPro:IPR018029), C2
calcium/lipid-binding domain, CaLB (InterPro:IPR008973),
Phospholipase D (InterPro:IPR015679), Phospholipase D,
plant (InterPro:IPR011402), Phospholipase
D/Transphosphatidylase (InterPro:IPR001736), C2
calcium-dependent membrane targeting (InterPro:IPR000008);
BEST Arabidopsis thaliana protein match is: phospholipase
D gamma 3 (TAIR:AT4G11840.1); Has 2194 Blast hits to 1721
proteins in 407 species: Archae - 2; Bacteria - 532;
Metazoa - 481; Fungi - 448; Plants - 557; Viruses - 0;
Other Eukaryotes - 174 (source: NCBI BLink)."
/db_xref="TAIR:AT4G11830"
/db_xref="Araport:AT4G11830"
intron_pos 36:1 (1/10)
intron_pos 288:0 (2/10)
intron_pos 327:0 (3/10)
intron_pos 392:0 (4/10)
intron_pos 474:0 (5/10)
intron_pos 497:0 (6/10)
intron_pos 546:1 (7/10)
intron_pos 596:0 (8/10)
intron_pos 662:0 (9/10)
intron_pos 728:0 (10/10)
BEGIN
1 MSMGGGSNHE FGQWLDQQLV PLATSSGSLM VELLHGRRIR KVDGEKSSKF TSDPYVTVSI
61 SGAVIGRTFV ISNSENPVWM QHFDVPVAHS AAEVHFVVKD NDPIGSKIIG VVGIPTKQLC
121 SGNRIEGLFP ILNSSGKPCR KGAMLSLSIQ YTPMERMRLY QKGVGSGVEC VGVPGTYFPL
181 RKGGRVTLYQ DAHVDDGTLP SVHLDGGIQY RHGKCWEDMA DAIRRARRLI YITGWSVFHP
241 VRLVRRNNDP TEGTLGELLK VKSQEGVRVL VLVWDDPTSM SFPGFSTKGL MNTSDEETRR
301 FFKHSSVQVL LCPRYGGKGH SFIKKSEVET IYTHHQKTMI VDAEAAQNRR KIVAFVGGLD
361 LCNGRFDTPK HSLFGTLKTL HKDDFHNPNF VTTEDVGPRE PWHDLHSKID GPAAYDVLAN
421 FEERWMASKP RGIGKGRTSF DDSLLRINRI PDIMGLSEAS SANDNDPESW HVQVFRSIDS
481 TSVKGFPKDP EEATGRNLLC GKNILIDMSI HAAYVKAIRS AQHFIYIENQ YFLGSSFNWD
541 SNKDLGANNL IPMEIALKIA NKIRARENFA AYIVIPMWPE GAPTSKPIQR ILYWQHKTMQ
601 MMYQTIYKAL LEVGLDGQLE PQDFLNFFCL GNREVGTREV PDGTVNVYNC PRKPPQPNAA
661 QVQALKSRRF MIYVHSKGMV VDDEFVLIGS ANINQRSLEG TRDTEIAMGG YQPHHSWAKK
721 GSRPRGQIFG YRMSLWAEHL GFLEQEFEEP ENMECVRRVR QLSELNWGQY AAEEVTEMSG
781 HLLKYPVQVD KTGKVSSLPG CETFPDLGGK IIGSFLTLQE NLTI
//