LOCUS AEE83053.1 461 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxymethylglutaryl-CoA synthase
/ HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme
A synthase protein.
ACCESSION CP002687-1683
PROTEIN_ID AEE83053.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HMGS"
/locus_tag="AT4G11820"
/gene_synonym="EMB2778"
/gene_synonym="EMBRYO DEFECTIVE 2778"
/gene_synonym="FKP1"
/gene_synonym="FLAKY POLLEN 1"
/gene_synonym="HMG-COA SYNTHASE"
/gene_synonym="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"
/gene_synonym="MVA1"
/gene_synonym="T26M18.30"
/gene_synonym="T26M18_30"
/inference="Similar to RNA sequence,
EST:INSD:AV814966.1,INSD:BP630506.1,INSD:EL034025.1,
INSD:BP804774.1,INSD:BP657204.1,INSD:DR352561.1,
INSD:DR352544.1,INSD:DR352549.1,INSD:ES190911.1,
INSD:DR352560.1,INSD:BE521327.1,INSD:DR352542.1,
INSD:DR352556.1,INSD:AV555012.1,INSD:ES172635.1,
INSD:DR352557.1,INSD:ES127346.1,INSD:BP824232.1,
INSD:ES026324.1,INSD:EG499467.1,INSD:DR352545.1,
INSD:EL974335.1,INSD:AI994474.1,INSD:EH884417.1,
INSD:DR352543.1,INSD:EH979488.1,INSD:ES034075.1,
INSD:BE521328.1,INSD:EL327439.1,INSD:DR352550.1,
INSD:ES043954.1,INSD:AV564559.1,INSD:ES121458.1,
INSD:ES172402.1,INSD:DR352552.1,INSD:AV560905.1,
INSD:EL136185.1,INSD:ES133446.1,INSD:AV813757.1,
INSD:BP648103.1,INSD:BP628168.1,INSD:BE529562.1,
INSD:EH835959.1,INSD:AI100024.1,INSD:AV549208.1,
INSD:ES041811.1,INSD:EH860016.1,INSD:BP586372.1,
INSD:AV535571.1,INSD:ES161951.1,INSD:DR352562.1,
INSD:AV440339.1,INSD:BP804494.1,INSD:BP585185.1,
INSD:AA395395.1,INSD:DR352558.1,INSD:CK120982.1,
INSD:DR352540.1,INSD:EL085600.1,INSD:DR352554.1,
INSD:BP851410.1,INSD:BX839199.1,INSD:DR352559.1,
INSD:BP617970.1,INSD:BP847830.1,INSD:EL206255.1,
INSD:EH922793.1,INSD:EH957484.1,INSD:BP836539.1,
INSD:T75941.1,INSD:EL262600.1,INSD:BE523919.1,
INSD:DR352547.1,INSD:ES118018.1,INSD:ES059374.1,
INSD:DR352553.1,INSD:DR373538.1,INSD:DR352548.1"
/inference="Similar to RNA sequence,
mRNA:INSD:X83882.1,INSD:BX828061.1,INSD:U79160.1,
INSD:BX827315.1,INSD:AY089051.1"
/note="MVA1; CONTAINS InterPro DOMAIN/s: Thiolase-like
(InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A
synthase C-terminal (InterPro:IPR013746),
Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
(InterPro:IPR013528), Hydroxymethylglutaryl-CoA synthase,
eukaryotic (InterPro:IPR010122),
Hydroxymethylglutaryl-coenzyme A synthase, active site
(InterPro:IPR000590); Has 2176 Blast hits to 2172 proteins
in 850 species: Archae - 228; Bacteria - 1039; Metazoa -
300; Fungi - 184; Plants - 117; Viruses - 0; Other
Eukaryotes - 308 (source: NCBI BLink)."
/db_xref="TAIR:AT4G11820"
/db_xref="Araport:AT4G11820"
intron_pos 22:0 (1/11)
intron_pos 57:2 (2/11)
intron_pos 102:0 (3/11)
intron_pos 150:0 (4/11)
intron_pos 203:0 (5/11)
intron_pos 227:2 (6/11)
intron_pos 253:0 (7/11)
intron_pos 271:2 (8/11)
intron_pos 301:0 (9/11)
intron_pos 348:0 (10/11)
intron_pos 398:0 (11/11)
BEGIN
1 MAKNVGILAM DIYFPPTCVQ QEALEAHDGA SKGKYTIGLG QDCLAFCTEL EDVISMSFNA
61 VTSLFEKYKI DPNQIGRLEV GSETVIDKSK SIKTFLMQLF EKCGNTDVEG VDSTNACYGG
121 TAALLNCVNW VESNSWDGRY GLVICTDSAV YAEGPARPTG GAAAIAMLIG PDAPIVFESK
181 LRASHMAHVY DFYKPNLASE YPVVDGKLSQ TCYLMALDSC YKHLCNKFEK IEGKEFSIND
241 ADYIVFHSPY NKLVQKSFAR LLYNDFLRNA SSIDEAAKEK FTPYSSLTLD ESYQSRDLEK
301 VSQQIAKPFY DAKVQPTTLI PKEVGNMYTA SLYAAFASLI HKKHNDLAGK RVVMFSYGSG
361 STATMFSLRL NDNKPPFSIS NIASVMDVGG KLKARHEYAP EKFVETMKLM EHRYGAKDFV
421 TTKEGIIDLL APGTYYLKEV DSLYRRFYGK KGEDGSVANG H
//