LOCUS AEE83052.1 406 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxymethylglutaryl-CoA synthase
/ HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme
A synthase protein.
ACCESSION CP002687-1685
PROTEIN_ID AEE83052.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HMGS"
/locus_tag="AT4G11820"
/gene_synonym="EMB2778"
/gene_synonym="EMBRYO DEFECTIVE 2778"
/gene_synonym="FKP1"
/gene_synonym="FLAKY POLLEN 1"
/gene_synonym="HMG-COA SYNTHASE"
/gene_synonym="HYDROXYMETHYLGLUTARYL-COA SYNTHASE"
/gene_synonym="MVA1"
/gene_synonym="T26M18.30"
/gene_synonym="T26M18_30"
/inference="Similar to RNA sequence,
EST:INSD:AV814966.1,INSD:BP630506.1,INSD:EL034025.1,
INSD:BP657204.1,INSD:ES190911.1,INSD:DR352549.1,
INSD:ES172635.1,INSD:ES127346.1,INSD:ES026324.1,
INSD:EG499467.1,INSD:EL974335.1,INSD:AI994474.1,
INSD:EH884417.1,INSD:EH979488.1,INSD:ES034075.1,
INSD:BE521328.1,INSD:EL327439.1,INSD:ES043954.1,
INSD:AV564559.1,INSD:ES121458.1,INSD:ES172402.1,
INSD:AV560905.1,INSD:EL136185.1,INSD:ES133446.1,
INSD:AV813757.1,INSD:BP648103.1,INSD:BP628168.1,
INSD:BE529562.1,INSD:EH835959.1,INSD:AI100024.1,
INSD:BP562400.2,INSD:AV549208.1,INSD:EH860016.1,
INSD:BP586372.1,INSD:ES161951.1,INSD:AV535571.1,
INSD:AV440339.1,INSD:DR352562.1,INSD:BP585185.1,
INSD:AA395395.1,INSD:EL085600.1,INSD:BP617970.1,
INSD:EH922793.1,INSD:EH957484.1,INSD:EL206255.1,
INSD:EL262600.1,INSD:ES118018.1,INSD:ES059374.1,
INSD:DR373538.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY140008.1"
/note="HYDROXYMETHYLGLUTARYL-COA SYNTHASE (HMGS); CONTAINS
InterPro DOMAIN/s: Hydroxymethylglutaryl-coenzyme A
synthase C-terminal (InterPro:IPR013746), Thiolase-like
(InterPro:IPR016039), Hydroxymethylglutaryl-coenzyme A
synthase, N-terminal (InterPro:IPR013528),
Hydroxymethylglutaryl-CoA synthase, eukaryotic
(InterPro:IPR010122), Hydroxymethylglutaryl-coenzyme A
synthase, active site (InterPro:IPR000590); Has 2141 Blast
hits to 2138 proteins in 847 species: Archae - 222;
Bacteria - 1037; Metazoa - 301; Fungi - 182; Plants - 116;
Viruses - 0; Other Eukaryotes - 283 (source: NCBI BLink)."
/db_xref="TAIR:AT4G11820"
/db_xref="Araport:AT4G11820"
intron_pos 2:2 (1/10)
intron_pos 47:0 (2/10)
intron_pos 95:0 (3/10)
intron_pos 148:0 (4/10)
intron_pos 172:2 (5/10)
intron_pos 198:0 (6/10)
intron_pos 216:2 (7/10)
intron_pos 246:0 (8/10)
intron_pos 293:0 (9/10)
intron_pos 343:0 (10/10)
BEGIN
1 MSFNAVTSLF EKYKIDPNQI GRLEVGSETV IDKSKSIKTF LMQLFEKCGN TDVEGVDSTN
61 ACYGGTAALL NCVNWVESNS WDGRYGLVIC TDSAVYAEGP ARPTGGAAAI AMLIGPDAPI
121 VFESKLRASH MAHVYDFYKP NLASEYPVVD GKLSQTCYLM ALDSCYKHLC NKFEKIEGKE
181 FSINDADYIV FHSPYNKLVQ KSFARLLYND FLRNASSIDE AAKEKFTPYS SLTLDESYQS
241 RDLEKVSQQI AKPFYDAKVQ PTTLIPKEVG NMYTASLYAA FASLIHKKHN DLAGKRVVMF
301 SYGSGSTATM FSLRLNDNKP PFSISNIASV MDVGGKLKAR HEYAPEKFVE TMKLMEHRYG
361 AKDFVTTKEG IIDLLAPGTY YLKEVDSLYR RFYGKKGEDG SVANGH
//