LOCUS AEE83037.2 1130 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA topoisomerase 4 subunit B (DUF810)
protein.
ACCESSION CP002687-1663
PROTEIN_ID AEE83037.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G11670"
/gene_synonym="T5C23.100"
/gene_synonym="T5C23_100"
/inference="Similar to RNA sequence,
EST:INSD:EL227645.1,INSD:EG525376.1,INSD:EH827778.1,
INSD:EL233099.1,INSD:EG525374.1,INSD:AV554835.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN: mitochondrion;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology
1 (InterPro:IPR014770), Protein of unknown function DUF810
(InterPro:IPR008528), Mammalian uncoordinated homology 13,
domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF810)
(TAIR:AT5G06970.1); Has 193 Blast hits to 179 proteins in
33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi -
8; Plants - 166; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink)."
/db_xref="TAIR:AT4G11670"
/db_xref="Araport:AT4G11670"
intron_pos 58:1 (1/25)
intron_pos 80:0 (2/25)
intron_pos 165:1 (3/25)
intron_pos 187:2 (4/25)
intron_pos 232:0 (5/25)
intron_pos 288:0 (6/25)
intron_pos 321:0 (7/25)
intron_pos 391:0 (8/25)
intron_pos 425:0 (9/25)
intron_pos 502:0 (10/25)
intron_pos 528:0 (11/25)
intron_pos 557:0 (12/25)
intron_pos 619:0 (13/25)
intron_pos 671:0 (14/25)
intron_pos 702:0 (15/25)
intron_pos 726:0 (16/25)
intron_pos 765:1 (17/25)
intron_pos 823:0 (18/25)
intron_pos 851:1 (19/25)
intron_pos 896:1 (20/25)
intron_pos 932:0 (21/25)
intron_pos 958:0 (22/25)
intron_pos 990:0 (23/25)
intron_pos 1022:0 (24/25)
intron_pos 1080:1 (25/25)
BEGIN
1 MDSLLQRYRN DRRKLMEFLM SSGLVKELRS PSGSPTSLSP ADLDALSADY VLDCVKSGGV
61 VDVSKGREKY NFDSSYPVTI HSESGDSYFL VSSPDLAGSP PHRMPPPPVN IEKSSNNGAD
121 MSRHMDSSNT PSARDNYVFK EETPDIKPVK PIKIIPLGLP PLRTGLSDDD LREAAYELMI
181 ASMLLSSFLT NSVEAYPTHR RKIEKSSRLM LSLKRKDKPH LQPQISNTHS EISSKMDTCI
241 RRNLVQLATL RTGEQIDLPQ LALGLLVGIF KSDFPNEKLY MKWKTRQANL LEEVLCFSPS
301 LEKNERATMR KCLATIRDSK EWDVVVSASL RIEVLSSIRQ VASKLSSLPG RCGIEEETYY
361 WTAIYHLNIR LYEKLLFGVF DTLDEGQVIE DASSMLFHMK SIWSTLGITE NLHSAIYGWV
421 LFQQFVCTGE PSLLGSTIQE LQKVTSAESG NPKEDLYLSH LVCSRQTIGT DIHLGLVKAI
481 LTSVSAWCDD KLQDYHLHFG KKPRDFGMLV RLASTVGLPP ADCTRTELIK LDTLSDDVSD
541 KIQSYVQNSI KGACARAAHF AYVKSHGERT HALALLANEL TVIAKVEINE FVPVFSKWLP
601 ECMMISAMLL HRFYGERLTP FLEGVSSLSG DVRKVVPAAY MLQEELTQLY NCHSKSKLRK
661 PYFHKLKNYE IEKAVKPVML DWLISQHDHI LQWTRRAFEI EEWEPLSVQQ RHAASIVEIF
721 RIIEETVSQL FGLHLPVDIT HLQALLSLIY HSLDTYLQRV FDQLVDKKFL YPSAPPLTRF
781 TENVMPVMKR KSLEFSEPDN KIVKKLDELT IPKLCIILNT LCYIQKQISA TEVGIRKSLT
841 LVEASLNKRS EIETDEAEVE NSLTHSEAVD ELFATTYDSL RDTNANCITK TRDLIGARAI
901 FWDLRDMFLI QLYNGTVEGA RLERILPHID SVLDTVCSLS YEDSRDMVVL SICRSALEAY
961 VRVLLDGGPT RAFSDSDITL MEEDLSILKE FFIADGEGLP RSLVEQEAKQ AKEILDLYSL
1021 ESDMLIQMLM TASELINMGV SSEQRRLEDA QTLVRVLCHK KDRNASKFLK RQYELPMSTE
1081 YEDVTLNLPA LSEIVRSTST HWSTASQNSF SSIKKKIQEA TSEIRNNSGW
//