LOCUS AEE82981.1 141 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002687-1583
PROTEIN_ID AEE82981.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G11175"
/gene_synonym="T22B4.1"
/gene_synonym="T22B4_1"
/inference="Similar to RNA sequence,
EST:INSD:DR334702.1,INSD:ES075901.1,INSD:EL157245.1,
INSD:EH945542.1,INSD:EH906296.1,INSD:EL275373.1,
INSD:DR334708.1,INSD:ES444421.1,INSD:DR334700.1,
INSD:DR334697.1,INSD:EL240073.1,INSD:EL248157.1,
INSD:EL280454.1,INSD:EL183249.1,INSD:EL047060.1,
INSD:ES053260.1,INSD:DR334701.1,INSD:ES444420.1,
INSD:EH898051.1,INSD:EH955494.1,INSD:DR334703.1,
INSD:EL222508.1,INSD:EH900712.1,INSD:EH894419.1,
INSD:DR334695.1,INSD:ES444419.1,INSD:DR334706.1,
INSD:ES017866.1,INSD:DR334699.1,INSD:DR334698.1,
INSD:EL294684.1,INSD:DR334696.1,INSD:AI995770.1,
INSD:EH879397.1,INSD:DR334691.1,INSD:ES023805.1,
INSD:EL262294.1,INSD:EH866721.1,INSD:DR334709.1,
INSD:EL207730.1,INSD:EH845452.1,INSD:DR334693.1,
INSD:AU229909.1,INSD:DR374042.1,INSD:DR334707.1,
INSD:BE039009.1,INSD:EL012748.1,INSD:DR334692.1,
INSD:DR334705.1,INSD:EL176226.1,INSD:EL171587.1,
INSD:EL136542.1,INSD:DR334704.1,INSD:EH952871.1,
INSD:ES444418.1,INSD:BP849051.1,INSD:EH839662.1,
INSD:EL052832.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828800.1,INSD:BT003712.1,INSD:AK117848.1,
INSD:AK221313.1"
/note="Nucleic acid-binding, OB-fold-like protein;
FUNCTIONS IN: RNA binding, translation initiation factor
activity; INVOLVED IN: translational initiation; LOCATED
IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Nucleic acid-binding, OB-fold
(InterPro:IPR012340), S1, IF1 type (InterPro:IPR006196),
Translation initiation factor IF-1 (InterPro:IPR004368);
Has 1807 Blast hits to 1807 proteins in 277 species:
Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347;
Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source:
NCBI BLink)."
/db_xref="TAIR:AT4G11175"
/db_xref="Araport:AT4G11175"
intron_pos 27:2 (1/1)
BEGIN
1 MLQLCSTFRP QLLLPCQFRF TNGVLIPQIN YVASNSVVNI RPMIRCQRAS GGRGGANRSK
61 PAKPQVKEGS NKTVIEGLVT ESLPNGMFRV DLENGDNILG YICGKIRKNF IRILPGDKVK
121 VEMSVYDSTK GRIIFRMSSR D
//