LOCUS AEE82970.1 446 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana HMG (high mobility group) box protein protein.
ACCESSION CP002687-1570
PROTEIN_ID AEE82970.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="3xHMG-box1"
/locus_tag="AT4G11080"
/gene_synonym="3xHigh Mobility Group-box1"
/gene_synonym="T22B4.60"
/gene_synonym="T22B4_60"
/inference="Similar to RNA sequence,
EST:INSD:ES185384.1,INSD:DR750967.1,INSD:EG495247.1,
INSD:ES138655.1,INSD:EL997390.1,INSD:DR750968.1,
INSD:EG495243.1,INSD:EL326610.1,INSD:ES065701.1,
INSD:ES125070.1,INSD:EL995507.1,INSD:ES094604.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY568657.1,INSD:AJ630485.1,INSD:AY133687.1"
/note="HMG (high mobility group) box protein; FUNCTIONS
IN: sequence-specific DNA binding transcription factor
activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: High mobility group,
superfamily (InterPro:IPR009071), High mobility group,
HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana
protein match is: HMG (high mobility group) box protein
(TAIR:AT4G23800.2); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink)."
/db_xref="TAIR:AT4G11080"
/db_xref="Araport:AT4G11080"
intron_pos 103:0 (1/7)
intron_pos 238:2 (2/7)
intron_pos 274:0 (3/7)
intron_pos 296:0 (4/7)
intron_pos 353:0 (5/7)
intron_pos 383:2 (6/7)
intron_pos 412:0 (7/7)
BEGIN
1 MSTVSSDPAH AKKSRNSRKA LKQKNEIVES SPVSDKGKET KSFEKDLMEM QAMLEKMKIE
61 KEKTEDLLKE KDEILRKKEV EQEKLKTELK KLQKMKEFKP NMTFAFSQSL AQTEEEKKGK
121 KKKKDCAETK RPSTPYILWC KDNWNEVKKQ NPEADFKETS NILGAKWKGI SAEEKKPYEE
181 KYQADKEAYL QVITKEKRER EAMKLLDDEQ KQKTAMELLD QYLHFVQEAE HDNKKKAKKI
241 KDPLKPKQPI SAYLIYANER RAALKGENKS VIEVAKMAGE EWKNLSEEKK APYDQMAKKN
301 KEIYLQEMEG YKRTKEEEAM SQKKEEEEFM KLHKQEALQL LKKKEKTDNI IKKTKETAKN
361 KKKNENVDPN KPKKPTSSYF LFCKDARKSV LEEHPGINNS TVTAHISLKW MELGEEEKQV
421 YNSKAAELME AYKKEVEEYN KTKTSS
//