LOCUS AEE82908.1 326 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana CTC-interacting domain 12 protein.
ACCESSION CP002687-1490
PROTEIN_ID AEE82908.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CID12"
/locus_tag="AT4G10610"
/gene_synonym="ATRBP37"
/gene_synonym="CTC-interacting domain 12"
/gene_synonym="RBP37"
/gene_synonym="RNA-BINDING PROTEIN 37"
/gene_synonym="T4F9.70"
/gene_synonym="T4F9_70"
/inference="Similar to RNA sequence,
EST:INSD:CB260288.1,INSD:Z37246.1,INSD:EH917132.1,
INSD:DR341812.1,INSD:DR341823.1,INSD:ES067897.1,
INSD:EL074893.1,INSD:DR341817.1,INSD:DR341832.1,
INSD:DR341822.1,INSD:AV564761.1,INSD:DR341828.1,
INSD:DR341800.1,INSD:BP825963.1,INSD:ES179599.1,
INSD:DR341827.1,INSD:AI100440.1,INSD:BP797079.1,
INSD:EG431429.1,INSD:AV553761.1,INSD:DR341831.1,
INSD:DR341802.1,INSD:EH979871.1,INSD:BP560844.1,
INSD:BP580425.1,INSD:DR341824.1,INSD:N95858.1,
INSD:BP836979.1,INSD:AV783859.1,INSD:DR341830.1,
INSD:BP577385.1,INSD:DR341803.1,INSD:BE525192.1,
INSD:DR341811.1,INSD:BP859591.1,INSD:DR341805.1,
INSD:AV814101.1,INSD:DR341829.1,INSD:BP801044.1,
INSD:BP802091.1,INSD:BP802290.1,INSD:EL164545.1,
INSD:DR341799.1,INSD:EG509281.1,INSD:BE525042.1,
INSD:EL145187.1,INSD:AV522277.1,INSD:DR341814.1,
INSD:DR341806.1,INSD:EG431418.1,INSD:BE525771.1,
INSD:DR341807.1,INSD:BP560920.2,INSD:EH923073.1,
INSD:DR341825.1,INSD:N37944.1,INSD:BP832284.1,
INSD:DR341819.1,INSD:EG454638.1,INSD:DR341836.1,
INSD:N37955.1,INSD:EL317437.1,INSD:AV524674.1,
INSD:ES152927.1,INSD:AV563503.1,INSD:DR341833.1,
INSD:DR341816.1,INSD:DR341795.1,INSD:AI992817.1,
INSD:BP868642.1,INSD:DR341804.1,INSD:DR341793.1,
INSD:BP802185.1,INSD:H37026.1,INSD:BP799766.1,
INSD:AV822228.1,INSD:N37958.1,INSD:BP802377.1,
INSD:BE038840.1,INSD:AA067415.1,INSD:BP592556.1,
INSD:DR341820.1,INSD:DR341813.1,INSD:DR341810.1,
INSD:AV557320.1,INSD:EG509282.1,INSD:DR341801.1,
INSD:EL033302.1,INSD:EL996558.1,INSD:DR341818.1,
INSD:DR341798.1,INSD:BE038834.1,INSD:DR341835.1,
INSD:EL290401.1,INSD:BE520684.1,INSD:ES015948.1,
INSD:BP638043.1,INSD:T42469.1,INSD:BP658495.1,
INSD:EL061065.1,INSD:AV783397.1,INSD:DR341796.1,
INSD:Z37247.1,INSD:ES212907.1,INSD:DR341815.1,
INSD:DR341826.1,INSD:ES065771.1,INSD:EH984506.1,
INSD:ES056195.1,INSD:DR341834.1,INSD:EL180766.1,
INSD:EL279598.1,INSD:BP574215.1,INSD:BP611081.1"
/note="RNA-BINDING PROTEIN 37 (RBP37); CONTAINS InterPro
DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677), Ataxin-2, C-terminal
(InterPro:IPR009818); BEST Arabidopsis thaliana protein
match is: CTC-interacting domain 11 (TAIR:AT1G32790.2);
Has 35333 Blast hits to 34131 proteins in 2444 species:
Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT4G10610"
/db_xref="Araport:AT4G10610"
intron_pos 124:0 (1/7)
intron_pos 161:0 (2/7)
intron_pos 176:0 (3/7)
intron_pos 200:1 (4/7)
intron_pos 238:0 (5/7)
intron_pos 258:0 (6/7)
intron_pos 297:0 (7/7)
BEGIN
1 MAVIESVGAN TTVEAGGLIS PSPPSSVTSQ ESGASSNNDH GGNGIHDEIG VHVARSDGGE
61 SFKRDMRELH ELLSKLNPMA KEFIPPSLTK PVVNGFNGGF FAVNNGFVAA GNFPVNEDGS
121 FRRKKSFGQQ GKRRMNPRTS LAQREEIIRR TVYVSDIDQQ VTEEQLAGLF IGFGQVVDCR
181 ICGDPNSVLR FAFIEFTDEV GARTALNLSG TMLGFYPVKV MPSKTAIAPV NPTFLPRTED
241 EREMCARTIY CTNIDKKLTQ TDIKLFFESV CGEVYRLRLL GDYHHPTRIG FVEFVMAESA
301 IAALNCSGVL LGSLPIRSKN KPTLTL
//