LOCUS AEE82884.1 194 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L6 family protein.
ACCESSION CP002687-1458
PROTEIN_ID AEE82884.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G10450"
/gene_synonym="F7L13.30"
/gene_synonym="F7L13_30"
/inference="Similar to RNA sequence,
EST:INSD:DR328264.1,INSD:EH948527.1,INSD:EL254156.1,
INSD:EL160330.1,INSD:ES180388.1,INSD:EG448604.1,
INSD:EL156398.1,INSD:ES170799.1,INSD:H36311.1,
INSD:EL317684.1,INSD:EL225139.1,INSD:EH842267.1,
INSD:ES145834.1,INSD:EH799052.1,INSD:ES126939.1,
INSD:EL263582.1,INSD:ES173309.1,INSD:EH840942.1,
INSD:ES159428.1,INSD:ES095744.1,INSD:AV829241.1,
INSD:ES192211.1,INSD:EL250448.1,INSD:EL977105.1,
INSD:EL098155.1,INSD:DR328271.1,INSD:EL162473.1,
INSD:EL264613.1,INSD:EH919450.1,INSD:AV557828.1,
INSD:BU636421.1,INSD:DR328268.1,INSD:DR328269.1,
INSD:ES094673.1,INSD:DR377176.1,INSD:DR328267.1,
INSD:EH837192.1,INSD:AV560217.1,INSD:DR328274.1,
INSD:EL323588.1,INSD:EL288089.1,INSD:EL081554.1,
INSD:BP586982.1,INSD:EH979316.1,INSD:AV815702.1,
INSD:EH994280.1,INSD:CA781984.1,INSD:DR328257.1,
INSD:ES118245.1,INSD:BP583814.1,INSD:DR328261.1,
INSD:EL248697.1,INSD:DR328258.1,INSD:AV557211.1,
INSD:DR328260.1,INSD:EL147436.1,INSD:AV805085.1,
INSD:ES053463.1,INSD:ES162363.1,INSD:EH976366.1,
INSD:EH893870.1,INSD:EL170728.1,INSD:DR328272.1,
INSD:DR328255.1,INSD:AV532168.1,INSD:AV541541.1,
INSD:DR383490.1,INSD:EL330573.1,INSD:DR328263.1,
INSD:EL995474.1,INSD:AV790089.1,INSD:EH943347.1,
INSD:DR328265.1,INSD:ES168250.1,INSD:EL301020.1,
INSD:ES143565.1,INSD:EH834924.1,INSD:T44862.1,
INSD:EL328192.1,INSD:EL282713.1,INSD:DR328273.1,
INSD:EL298189.1,INSD:DR328256.1,INSD:EH840426.1,
INSD:ES151622.1,INSD:BP781591.1,INSD:BP567612.1,
INSD:EL294008.1,INSD:EL038012.1,INSD:DR328270.1,
INSD:DR328262.1,INSD:BP864900.1,INSD:ES133502.1,
INSD:AV786854.1,INSD:DR328266.1,INSD:EL990568.1,
INSD:DR328259.1,INSD:EL162322.1,INSD:EL166709.1,
INSD:DR328254.1,INSD:BP563474.1,INSD:BP566731.1,
INSD:DR373336.1,INSD:EL180020.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086090.1,INSD:AY117346.1,INSD:BX829170.1,
INSD:AY065259.1,INSD:BX827856.1"
/note="Ribosomal protein L6 family; FUNCTIONS IN:
structural constituent of ribosome, rRNA binding; INVOLVED
IN: translation; LOCATED IN: cytosolic ribosome, cytosolic
large ribosomal subunit, large ribosomal subunit;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal
protein L6 (InterPro:IPR000702), Ribosomal protein L6,
alpha-beta domain (InterPro:IPR020040), Ribosomal protein
L6, conserved site-2 (InterPro:IPR002359); BEST
Arabidopsis thaliana protein match is: Ribosomal protein
L6 family (TAIR:AT1G33140.1); Has 2629 Blast hits to 2626
proteins in 920 species: Archae - 312; Bacteria - 1081;
Metazoa - 421; Fungi - 181; Plants - 347; Viruses - 0;
Other Eukaryotes - 287 (source: NCBI BLink)."
/db_xref="TAIR:AT4G10450"
/db_xref="Araport:AT4G10450"
intron_pos 126:0 (1/2)
intron_pos 167:0 (2/2)
BEGIN
1 MKTILSSETM DIPDGVAIKV NAKVIEVEGP RGKLTRDFKH LNLDFQLIKD QVTGKRQLKI
61 DSWFGSRKTS ASIRTALSHV DNLIAGVTQG FLYRMRFVYA HFPINASIDG NNKSIEIRNF
121 LGEKKVRKVE MLDGVKIVRS EKVKDEIILE GNDIELVSRS CALINQKCHV KKKDIRKFLD
181 GIYVSEKGKI AVEE
//