LOCUS AEE82867.1 1190 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tRNA synthetase class I (I, L, M
and V) family protein protein.
ACCESSION CP002687-1432
PROTEIN_ID AEE82867.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G10320"
/gene_synonym="F24G24.120"
/gene_synonym="F24G24_120"
/inference="Similar to RNA sequence,
EST:INSD:EG513016.1,INSD:EG512983.1,INSD:ES111225.1,
INSD:ES099464.1,INSD:AV532764.1,INSD:DR244676.1,
INSD:EG474739.1,INSD:EG512981.1,INSD:EG512998.1,
INSD:EL177065.1,INSD:EG513009.1,INSD:AV562849.1,
INSD:AV547276.1,INSD:EG513012.1,INSD:EL280059.1,
INSD:EL253698.1,INSD:EL998572.1,INSD:EG528222.1,
INSD:EL198826.1,INSD:ES080191.1,INSD:EL075771.1,
INSD:EG474733.1,INSD:AV547576.1,INSD:EH972987.1,
INSD:ES175462.1,INSD:EL100581.1,INSD:EL085705.1,
INSD:EG485823.1,INSD:DR369153.1,INSD:EG513015.1,
INSD:EH804458.1,INSD:EL012568.1,INSD:EL184233.1,
INSD:EG480160.1,INSD:EL191192.1,INSD:DR379294.1,
INSD:EG528220.1,INSD:EG480016.1,INSD:EG474765.1,
INSD:EH941986.1,INSD:EH957568.1,INSD:ES077153.1,
INSD:EH920862.1,INSD:EG475103.1,INSD:EH835725.1,
INSD:EG513010.1,INSD:ES133991.1,INSD:EG513002.1,
INSD:EH839995.1,INSD:EL252188.1,INSD:AV547277.1,
INSD:EG475101.1,INSD:EH832463.1,INSD:EG475102.1,
INSD:EH816257.1,INSD:EL162741.1,INSD:EH825595.1,
INSD:ES127798.1,INSD:EH963415.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX826368.1,INSD:BX827114.1,INSD:BX826789.1"
/note="tRNA synthetase class I (I, L, M and V) family
protein; FUNCTIONS IN: isoleucine-tRNA ligase activity,
nucleotide binding, aminoacyl-tRNA ligase activity, zinc
ion binding, ATP binding; INVOLVED IN: response to cadmium
ion, tRNA aminoacylation for protein translation; LOCATED
IN: cytosol; EXPRESSED IN: male gametophyte, guard cell,
epidermis, cultured cell, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage; CONTAINS
InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I,
conserved site (InterPro:IPR001412), Isoleucyl-tRNA
synthetase (InterPro:IPR018353), Isoleucyl-tRNA
synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding
(InterPro:IPR009080), Rossmann-like alpha/beta/alpha
sandwich fold (InterPro:IPR014729), Isoleucyl-tRNA
synthetase, class Ia, N-terminal (InterPro:IPR015905),
Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I,
anticodon-binding (InterPro:IPR013155),
Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing
(InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia
(InterPro:IPR002300); BEST Arabidopsis thaliana protein
match is: tRNA synthetase class I (I, L, M and V) family
protein (TAIR:AT5G49030.3); Has 38868 Blast hits to 32849
proteins in 3074 species: Archae - 1055; Bacteria - 22228;
Metazoa - 780; Fungi - 735; Plants - 304; Viruses - 0;
Other Eukaryotes - 13766 (source: NCBI BLink)."
/db_xref="TAIR:AT4G10320"
/db_xref="Araport:AT4G10320"
intron_pos 179:0 (1/24)
intron_pos 201:0 (2/24)
intron_pos 375:0 (3/24)
intron_pos 413:0 (4/24)
intron_pos 445:2 (5/24)
intron_pos 472:0 (6/24)
intron_pos 525:0 (7/24)
intron_pos 555:0 (8/24)
intron_pos 599:2 (9/24)
intron_pos 653:0 (10/24)
intron_pos 681:0 (11/24)
intron_pos 751:0 (12/24)
intron_pos 793:0 (13/24)
intron_pos 839:0 (14/24)
intron_pos 873:2 (15/24)
intron_pos 895:0 (16/24)
intron_pos 924:2 (17/24)
intron_pos 972:0 (18/24)
intron_pos 993:1 (19/24)
intron_pos 1016:0 (20/24)
intron_pos 1057:0 (21/24)
intron_pos 1079:0 (22/24)
intron_pos 1126:1 (23/24)
intron_pos 1157:0 (24/24)
BEGIN
1 MEEVCEGKEF SFPRQEEDVL SFWTEIDAFK TQLKRTENLP EYIFYDGPPF ATGLPHYGHI
61 LAGTIKDIVT RYQTMTGHHV TRRFGWDCHG LPVENEIDRK LNIKRRDEVI KMGIDKYNEE
121 CRSIVTRYVA EWEKVITRCG RWIDFKNDYK TMDLPFMESV WWVFSQLWEK NLVYRGFKVM
181 PYSTGCKTPL SNFEAGQNYK EVPDPEIMVT FPVIGDQDNA AFVAWTTTPW TLPSNLALCV
241 NAKFVYVKVR NKNTGKVYIV AESRLSALPT DKPKAKLSNG PAGDTKKANP KAKGAKPESA
301 ADSYEVLEKF NGASLVGKKY EPLFDYFSDF SSEAFRVVAD DYVTDDSGTG IVHCAPAFGE
361 DDYRVCLLNK IIKKGENLVV AVDDDGLFTE RITHFSGRYV KDADKDIIEA VKAKGRLVKT
421 GSFTHSYPFC WRSDTPLIYR AVPSWFVRVE QLKEKLLKSN EQTEWVPGYV KDKRFHNWLE
481 NARDWAISRS RFWGTPLPIW ISDDGEEVVI MDSVEKLEKL SGVKVFDLHR HHIDHITIPS
541 SRGDEFGVLR RVEDVFDCWF ESGSMPYAYI HYPFENKELF EKNFPGDFVA EGLDQTRGWF
601 YTLMVLSTAL FEKPAFKNLI CNGLVLAEDG KKMAKKLRNY PPPLEVIDEY GADAVRLYLI
661 NSPVVRAEPL RFKKEGVLGV VKDVFLPWYN AYRFLVQNAK RLETEGGVPF VPTDLATIQS
721 ANILDQWIHS ATQSLVRFVR EEMDAYRLYT VVPRLLKFLD NLTNIYVRFN RKRLKGRTGE
781 DDCHTALSTL FNVLLTSCKV MAPFTPFFTE TLYQNLRKAC KGSEESVHYC SIPPREGMEG
841 ERIELSVTRM MKIIDLARNI RERNKLPLKT PLKEMIVVHP DADFLNDITG VLREYVLEEL
901 NVRSLVPCND TLKYASLKAE PDFSVLGKRL GKSMGLVAKE VKEMSQKDIL AFEEAGEVTI
961 ANHLLKETDI KIVRVFKRPD DLKENEIDSA GDGDVLVILD LRADDSLVEA GFAREIVNRI
1021 QKLRKKSGLE PTDFVEVYFQ SLDEDESVSK QVLVSQEQNI KDSIGSTLLL SSLMPSHAVI
1081 IADETFTPKE TSDESVKKVP KLSYKISLAR PALKFNEEAV LALYSGDVKS ATGLQTYLLS
1141 RDHSNLKSEF QAGDGKITVS CIENVPVATV VLGEHLHLSV GDDLLSKRNA
//