LOCUS AEE82835.2 685 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana KH domain-containing protein protein.
ACCESSION CP002687-1392
PROTEIN_ID AEE82835.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G10070"
/gene_synonym="F28M11.1"
/inference="Similar to RNA sequence,
EST:INSD:ES032939.1,INSD:AV439885.1,INSD:EH823414.1,
INSD:AV523013.1,INSD:EL064919.1,INSD:EG487527.1,
INSD:BP807000.1,INSD:BX840120.1,INSD:EG487526.1,
INSD:AV529821.1,INSD:AV441608.1"
/note="KH domain-containing protein; FUNCTIONS IN: RNA
binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K
Homology (InterPro:IPR004087), K Homology, type 1,
subgroup (InterPro:IPR018111), K Homology, type 1
(InterPro:IPR004088); BEST Arabidopsis thaliana protein
match is: KH domain-containing protein (TAIR:AT1G33680.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G10070"
/db_xref="Araport:AT4G10070"
intron_pos 56:1 (1/6)
intron_pos 187:0 (2/6)
intron_pos 249:0 (3/6)
intron_pos 283:0 (4/6)
intron_pos 307:0 (5/6)
intron_pos 345:0 (6/6)
BEGIN
1 MTEEDFVVIS TPPVDLKRKL DEVELNGNIV DDSNQTSDSS QAKRAKLEDE AQDGLDYGNT
61 QENGSSMEVK EEEQLQEPKE ENQDSVPLVE EVQDPIHADE SENKICSVDQ PTDDQVKPED
121 NQQGCIEDVN GGEHQKVIDD DSKEVNDGSS QENGKEENKE VDGEKSQKEV DGTQSTTRRI
181 DVPSSKVGVL IGKGGETIRY LQFNSGAKIQ ILRDSEADPS SALRPVEIIG SVACIESAEK
241 LISAVIAEAE AGGSPALVAR GHPSTHAIGI PEQIEIKVPN DKVGLIIGRG GETIKNMQTR
301 SGARTQLIPQ HAEGDGLKER TVRISGDKMQ IDIATDMIKD VMNQNARPSS YSGGYNQPAY
361 RPQGPGGPPQ WGSRGPHAPH PYDYHPRGPY SSQGSYYNSP GFGGYPPQHM PPRGGYGTDW
421 DQRPPYSGPY NYYGRQGAQS AGPVPPPSGP VPSPAFGGPP LSQVSYGYGQ SHGPEYGHAA
481 PYSQTGYQQT YGQTYEQPKY DSNPPMQPPY GGSYPPAGGG QSGYYQMQQP GVRPYGMQQG
541 PVQQGYGPPQ PAAAASSGDV PYQGATPAAP SYGSTNMAPQ QQQYGYTSSD GPVQQQTYPS
601 YSSAPPSDAY NNGTQTPATG PAYQQQSVQP ASSTYDQTGA QQAAAAGYGG QVAPTGGYTY
661 PTSQPAYGTS QTQNYGYNTS SQDPN
//