LOCUS AEE82830.1 389 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxysteroid dehydrogenase 5 protein.
ACCESSION CP002687-1385
PROTEIN_ID AEE82830.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HSD5"
/locus_tag="AT4G10020"
/gene_synonym="AtHSD5"
/gene_synonym="hydroxysteroid dehydrogenase 5"
/gene_synonym="T5L19.150"
/gene_synonym="T5L19_150"
/inference="Similar to RNA sequence,
EST:INSD:BP807970.1,INSD:BP826515.1,INSD:BP591368.1,
INSD:BP640780.1,INSD:BP656826.1,INSD:BP827022.1,
INSD:AU236950.1,INSD:BP660343.1,INSD:BP587443.1,
INSD:BP817005.1,INSD:DR371068.1,INSD:BX836816.1,
INSD:BP820579.1,INSD:BP656353.1,INSD:BP644196.1,
INSD:BP827800.1,INSD:AU229600.1,INSD:Z27034.1,
INSD:BP644719.1,INSD:BP632508.1,INSD:AA395175.1,
INSD:AI995318.1,INSD:BP639341.1,INSD:BP830876.1,
INSD:AU227957.1,INSD:BP825603.1,INSD:Z35038.1,
INSD:BP812101.1,INSD:Z29869.1,INSD:BP836280.1,
INSD:BP821396.1,INSD:BP814508.1,INSD:BP594141.1,
INSD:BP654149.1,INSD:AA041112.1,INSD:BP585155.1,
INSD:BP642983.1,INSD:BP833385.1,INSD:BE527458.1,
INSD:BP833787.1"
/inference="Similar to RNA sequence, mRNA:INSD:BT004103.1"
/note="hydroxysteroid dehydrogenase 5 (HSD5); FUNCTIONS
IN: oxidoreductase activity, binding, catalytic activity;
INVOLVED IN: oxidation reduction, metabolic process;
LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Short-chain dehydrogenase/reductase, conserved
site (InterPro:IPR020904), NAD(P)-binding domain
(InterPro:IPR016040), Glucose/ribitol dehydrogenase
(InterPro:IPR002347), Short-chain dehydrogenase/reductase
SDR (InterPro:IPR002198); BEST Arabidopsis thaliana
protein match is: hydroxysteroid dehydrogenase 1
(TAIR:AT5G50600.1); Has 75328 Blast hits to 75030 proteins
in 3270 species: Archae - 807; Bacteria - 52029; Metazoa -
4592; Fungi - 3635; Plants - 1773; Viruses - 2; Other
Eukaryotes - 12490 (source: NCBI BLink)."
/db_xref="TAIR:AT4G10020"
/db_xref="Araport:AT4G10020"
intron_pos 64:0 (1/5)
intron_pos 128:1 (2/5)
intron_pos 157:0 (3/5)
intron_pos 201:0 (4/5)
intron_pos 256:0 (5/5)
BEGIN
1 MVDLLNSVMN LVAPPATMVV MAFAWPLLSF ISFSERAYNS YFATENMEDK VVVITGASSA
61 IGEQIAYEYA KRGANLVLVA RREQRLRVVS NKAKQIGANH VIIIAADVIK EDDCRRFITQ
121 AVNYYGRVDH LVNTASLGHT FYFEEVSDTT VFPHLLDINF WGNVYPTYVA LPYLHQTNGR
181 IVVNASVENW LPLPRMSLYS AAKAALVNFY ETLRFELNGD VGITIATHGW IGSEMSGGKF
241 MLEEGAEMQW KEEREVPANG GPLEEFAKMI VAGACRGDAY VKFPNWYDVF LLYRVFTPNV
301 LRWTFKLLLS TEGTRRSSLV GVGSGMPVDE SSSQMKLMLE GGPPRVPASP PRYTASPPHY
361 TASPPRYPAS PPRYPASPPR FSQFNIQEL
//