LOCUS AEE82713.1 764 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana isoamylase 3 protein.
ACCESSION CP002687-1232
PROTEIN_ID AEE82713.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ISA3"
/locus_tag="AT4G09020"
/gene_synonym="ATISA3"
/gene_synonym="F23J3.50"
/gene_synonym="F23J3_50"
/gene_synonym="isoamylase 3"
/inference="Similar to RNA sequence,
EST:INSD:ES009781.1,INSD:BU636114.1,INSD:ES113153.1,
INSD:EL300508.1,INSD:EL973912.1,INSD:ES130732.1,
INSD:CB262801.1,INSD:AV809359.1,INSD:ES117010.1,
INSD:EH879705.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX826408.1"
/note="isoamylase 3 (ISA3); FUNCTIONS IN: isoamylase
activity, alpha-amylase activity; INVOLVED IN:
carbohydrate metabolic process, starch catabolic process;
LOCATED IN: chloroplast, chloroplast stroma, chloroplast
starch grain; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glycosyl hydrolase, family 13, all-beta
(InterPro:IPR013780), Immunoglobulin-like fold
(InterPro:IPR013783), Glycoside hydrolase, family 13,
N-terminal (InterPro:IPR004193), Immunoglobulin E-set
(InterPro:IPR014756), Glycoside hydrolase, catalytic core
(InterPro:IPR017853), Glycoside hydrolase, subgroup,
catalytic core (InterPro:IPR013781), Glycosyl hydrolase,
family 13, catalytic domain (InterPro:IPR006047); BEST
Arabidopsis thaliana protein match is: isoamylase 1
(TAIR:AT2G39930.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G09020"
/db_xref="Araport:AT4G09020"
intron_pos 35:2 (1/23)
intron_pos 52:0 (2/23)
intron_pos 72:0 (3/23)
intron_pos 123:2 (4/23)
intron_pos 155:0 (5/23)
intron_pos 234:0 (6/23)
intron_pos 269:0 (7/23)
intron_pos 304:0 (8/23)
intron_pos 349:0 (9/23)
intron_pos 378:0 (10/23)
intron_pos 395:1 (11/23)
intron_pos 416:2 (12/23)
intron_pos 450:0 (13/23)
intron_pos 483:2 (14/23)
intron_pos 501:0 (15/23)
intron_pos 522:0 (16/23)
intron_pos 552:0 (17/23)
intron_pos 576:1 (18/23)
intron_pos 603:0 (19/23)
intron_pos 638:0 (20/23)
intron_pos 671:0 (21/23)
intron_pos 691:2 (22/23)
intron_pos 729:0 (23/23)
BEGIN
1 MLTSPSSSST YDPFSSNFSP SLTNAFSSSF TIPMGLKLSR RVTRARIFSR KIKDRSTLKV
61 TCRRAHERVV EEEASTMTET KLFKVSSGEV SPLGVSQVDK GINFALFSQN ATSVTLCLSL
121 SQSGKDDTDD DGMIELVLDP SVNKTGDTWH ICVEDLPLNN VLYGYRVDGP GEWQQGHRFD
181 RSILLLDPYA KLVKGHSSFG DSSQKFAQFY GTYDFESSPF DWGDDYKFPN IPEKDLVIYE
241 MNVRAFTADE SSGMDPAIGG SYLGFIEKIP HLQDLGINAV ELLPVFEFDE LELQRRSNPR
301 DHMVNTWGYS TVNFFAPMSR YASGEGDPIK ASKEFKEMVK ALHSAGIEVI LDVVYNHTNE
361 ADDKYPYTTS FRGIDNKVYY MLDPNNQLLN FSGCGNTLNC NHPVVMELIL DSLRHWVTEY
421 HVDGFRFDLA SVLCRATDGS PLSAPPLIRA IAKDSVLSRC KIIAEPWDCG GLYLVGKFPN
481 WDRWAEWNGM YRDDVRRFIK GDSGMKGSFA TRVSGSSDLY QVNQRKPYHG VNFVIAHDGF
541 TLRDLVSYNF KHNEANGEGG NDGCNDNHSW NCGFEGETGD AHIKSLRTRQ MKNFHLALMI
601 SQGTPMMLMG DEYGHTRYGN NNSYGHDTSL NNFQWKELDA KKQNHFRFFS EVIKFRHSHH
661 VLKHENFLTQ GEITWHEDNW DNSESKFLAF TLHDGIGGRD IYVAFNAHDY FVKALIPQPP
721 PGKQWFRVAD TNLESPDDFV REGVAGVADT YNVAPFSSIL LQSK
//