LOCUS AEE82696.1 681 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cryptochrome 1 protein.
ACCESSION CP002687-1215
PROTEIN_ID AEE82696.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CRY1"
/locus_tag="AT4G08920"
/gene_synonym="ATCRY1"
/gene_synonym="BLU1"
/gene_synonym="BLUE LIGHT UNINHIBITED 1"
/gene_synonym="cryptochrome 1"
/gene_synonym="CRYPTOCHROME 1 APOPROTEIN (BLUE LIGHT
PHOTORECEPTOR"
/gene_synonym="ELONGATED HYPOCOTYL 4"
/gene_synonym="HY4"
/gene_synonym="OOP2"
/gene_synonym="OUT OF PHASE 2"
/gene_synonym="T3H13.14"
/gene_synonym="T3H13_14"
/inference="Similar to RNA sequence,
EST:INSD:BP586897.1,INSD:EH976057.1,INSD:EH921392.1,
INSD:EL115709.1,INSD:AV797453.1,INSD:EL077962.1,
INSD:EL264880.1,INSD:EH838165.1,INSD:EH993897.1,
INSD:EH810224.1,INSD:AV808014.1,INSD:BP845403.1,
INSD:EH957512.1,INSD:EL013628.1,INSD:EG470872.1,
INSD:EH976400.1,INSD:EL167779.1,INSD:T04188.1,
INSD:EL084237.1,INSD:AV805087.1,INSD:EG437942.1,
INSD:EL306034.1,INSD:AV523147.1,INSD:ES158097.1,
INSD:BP561686.2,INSD:EH846097.1,INSD:EG462619.1,
INSD:EH912757.1,INSD:BP836933.1,INSD:EH830191.1,
INSD:EG491299.1,INSD:ES053908.1,INSD:EL233714.1,
INSD:BP836932.1,INSD:EL068617.1,INSD:DR225587.1,
INSD:EL181785.1,INSD:EH865032.1,INSD:EL275511.1,
INSD:EL088058.1,INSD:EL992181.1,INSD:EL166681.1,
INSD:EH948576.1,INSD:EH874223.1,INSD:EL018979.1,
INSD:BP598543.1,INSD:EL013240.1,INSD:EH979978.1,
INSD:EL162308.1,INSD:EL310401.1,INSD:EG439859.1,
INSD:ES146131.1,INSD:AV812641.1,INSD:EH979268.1,
INSD:EG437943.1,INSD:BP635602.1,INSD:EL056818.1,
INSD:EH915826.1,INSD:EL064019.1,INSD:EH832439.1,
INSD:AI998722.1,INSD:AV818915.1,INSD:EL319448.1,
INSD:EG491298.1,INSD:EL182736.1,INSD:R90231.1,
INSD:EL049690.1,INSD:AV529535.1,INSD:EL267374.1,
INSD:ES056894.1,INSD:EL191943.1,INSD:EH834238.1,
INSD:EH864237.1,INSD:ES119312.1,INSD:EH817419.1,
INSD:BP861889.1,INSD:EL000111.1,INSD:AV817528.1,
INSD:DR225588.1,INSD:BP670581.1,INSD:EL131780.1,
INSD:BP587715.1,INSD:EH975749.1,INSD:EL007849.1,
INSD:BP608873.1,INSD:EL243160.1,INSD:EL176053.1,
INSD:BP598009.1,INSD:EL111358.1,INSD:ES112829.1,
INSD:EL021750.1,INSD:EL088149.1,INSD:BP803735.1,
INSD:EL147381.1,INSD:EL328253.1,INSD:EL002215.1,
INSD:AV523152.1,INSD:AV528762.1,INSD:EL304384.1,
INSD:BP861674.1,INSD:AV797282.1,INSD:EL189083.1,
INSD:EG470877.1,INSD:AV787581.1,INSD:AV525335.1,
INSD:AV523781.1,INSD:EH808091.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF361588.1,INSD:S66909.1,INSD:S66907.1"
/note="cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s:
Rossmann-like alpha/beta/alpha sandwich fold
(InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1
conserved site, C-terminal (InterPro:IPR018394), DNA
photolyase, N-terminal (InterPro:IPR006050), Cryptochrome
C-terminal (InterPro:IPR020978), DNA photolyase,
FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101),
Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA
photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis
thaliana protein match is: cryptochrome 2
(TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G08920"
/db_xref="Araport:AT4G08920"
intron_pos 112:1 (1/3)
intron_pos 185:1 (2/3)
intron_pos 681:2 (3/3)
BEGIN
1 MSGSVSGCGS GGCSIVWFRR DLRVEDNPAL AAAVRAGPVI ALFVWAPEEE GHYHPGRVSR
61 WWLKNSLAQL DSSLRSLGTC LITKRSTDSV ASLLDVVKST GASQIFFNHL YDPLSLVRDH
121 RAKDVLTAQG IAVRSFNADL LYEPWEVTDE LGRPFSMFAA FWERCLSMPY DPESPLLPPK
181 KIISGDVSKC VADPLVFEDD SEKGSNALLA RAWSPGWSNG DKALTTFING PLLEYSKNRR
241 KADSATTSFL SPHLHFGEVS VRKVFHLVRI KQVAWANEGN EAGEESVNLF LKSIGLREYS
301 RYISFNHPYS HERPLLGHLK FFPWAVDENY FKAWRQGRTG YPLVDAGMRE LWATGWLHDR
361 IRVVVSSFFV KVLQLPWRWG MKYFWDTLLD ADLESDALGW QYITGTLPDS REFDRIDNPQ
421 FEGYKFDPNG EYVRRWLPEL SRLPTDWIHH PWNAPESVLQ AAGIELGSNY PLPIVGLDEA
481 KARLHEALSQ MWQLEAASRA AIENGSEEGL GDSAEVEEAP IEFPRDITME ETEPTRLNPN
541 RRYEDQMVPS ITSSLIRPEE DEESSLNLRN SVGDSRAEVP RNMVNTNQAQ QRRAEPASNQ
601 VTAMIPEFNI RIVAESTEDS TAESSSSGRR ERSGGIVPEW SPGYSEQFPS EENGIGGGST
661 TSSYLQNHHE ILNWRRLSQT G
//