LOCUS AEE82625.1 426 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002687-1123
PROTEIN_ID AEE82625.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="TPR8"
/locus_tag="AT4G08320"
/gene_synonym="T28D5.10"
/gene_synonym="T28D5_10"
/gene_synonym="tetratricopeptide repeat 8"
/inference="Similar to RNA sequence,
EST:INSD:ES134559.1,INSD:ES092317.1,INSD:ES103761.1,
INSD:BP564775.1,INSD:AU229683.1,INSD:BP611600.1,
INSD:T21428.1,INSD:BP612223.1,INSD:ES035062.1,
INSD:BP567457.1,INSD:ES136598.1,INSD:AV557168.1,
INSD:ES113038.1,INSD:ES010726.1,INSD:BP670122.1,
INSD:ES167340.1,INSD:BX836853.1,INSD:AV557050.1,
INSD:AU226590.1,INSD:EL182294.1,INSD:AU235823.1,
INSD:EL978999.1,INSD:BP620388.1,INSD:ES207553.1,
INSD:AA586304.1,INSD:BP663645.1,INSD:EH856676.1,
INSD:AV558261.1,INSD:ES072086.1,INSD:EL333382.1,
INSD:ES123085.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827585.1,INSD:BX826356.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide TPR-1 (InterPro:IPR001440),
Tetratricopeptide-like helical (InterPro:IPR011990),
Tetratricopeptide repeat-containing (InterPro:IPR013026),
Tetratricopeptide repeat (InterPro:IPR019734); BEST
Arabidopsis thaliana protein match is: protein phosphatase
5.2 (TAIR:AT2G42810.1); Has 13789 Blast hits to 9498
proteins in 788 species: Archae - 336; Bacteria - 3462;
Metazoa - 3175; Fungi - 1138; Plants - 1489; Viruses - 0;
Other Eukaryotes - 4189 (source: NCBI BLink)."
/db_xref="TAIR:AT4G08320"
/db_xref="Araport:AT4G08320"
intron_pos 25:1 (1/8)
intron_pos 114:1 (2/8)
intron_pos 160:0 (3/8)
intron_pos 182:1 (4/8)
intron_pos 215:2 (5/8)
intron_pos 270:1 (6/8)
intron_pos 286:0 (7/8)
intron_pos 303:0 (8/8)
BEGIN
1 MAKLTTDSPL CRKIVRSFLN FLDSVEVAPG VDEEGLEVAR ECLREAFKLN SDSSRDDDDD
61 SFKPISLVNL FTSLDNNETI PPPPPPPVAA TTQDPSSSGS HVSVDTCKEP SFTGTSRDEL
121 FGQLFGALEK VRYFRNTPDG DDDPAQLEKA TRIFHDCVNE MEKSGCQTFD VNSLAETLKC
181 QGNKAMQSNL YLEAVELYSF AIALTDKNAV FYCNRAAAYT QINMCSEAIK DCLKSIEIDP
241 NYSKAYSRLG LAYYAQGKYA EAIEKGFKKA LLLDPHNESV KENIRVAEQK IREEQQRQRR
301 SQNTSTFYTQ EPEMGGGQGI PSQFSMPVNP DLMSMFMNMA GNTFPGNHSR NNEGGAGGDG
361 TRNGADEPEI HVGGNINIDL GGTEQMPEDL SGALRSMMQM FGGSMGGTGN NNPQDSNGAQ
421 GRPSGN
//